RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 APOBEC3AP31941 199 aaPredicted RBP8.42□□□□□ -1.06
USP54-207ENST00000451492 PTDSS1P48651 473 aaKnown RBP8.42□□□□□ -1.06
USP54-207ENST00000451492 NUDT2P50583 147 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 SLC7A2P52569 658 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 MYBPC1Q00872 1141 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 NAAAQ02083 359 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 PIN1Q13526 163 aaPredicted RBP8.42□□□□□ -1.06
USP54-207ENST00000451492 ETFDHQ16134 617 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 CARTPTQ16568 116 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 KRT80Q6KB66 452 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 ZNF544Q6NX49 715 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 LINC00114Q6XXX2 140 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 HIST3H2AQ7L7L0 130 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 SLC46A3Q7Z3Q1 461 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 SPATA21Q7Z572 469 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 PXKQ7Z7A4 578 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 VTCN1Q7Z7D3 282 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 MEX3DQ86XN8 651 aaKnown RBP8.42□□□□□ -1.06
USP54-207ENST00000451492 ZNF525Q8N782 197 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 ANKS4BQ8N8V4 417 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 OR6S1Q8NH40 331 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 HIST1H2ACQ93077 130 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 ZNF317Q96PQ6 595 aaPredicted RBP8.42□□□□□ -1.06
USP54-207ENST00000451492 VRK1Q99986 396 aaPredicted RBP8.42□□□□□ -1.06
USP54-207ENST00000451492 ELAC2Q9BQ52 826 aaKnown RBP8.42□□□□□ -1.06
USP54-207ENST00000451492 PRSS27Q9BQR3 290 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 REG4Q9BYZ8 158 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 BARX1Q9HBU1 254 aaPredicted RBP8.42□□□□□ -1.06
USP54-207ENST00000451492 NOX3Q9HBY0 568 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 OBP2BQ9NPH6 170 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 MEPEQ9NQ76 525 aaPredicted RBP8.42□□□□□ -1.06
USP54-207ENST00000451492 C20orf141Q9NUB4 165 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 CMTM6Q9NX76 183 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 TAS2R5Q9NYW4 299 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 ZNF229Q9UJW7 825 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 ARFGEF3Q5TH69 2177 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 PLCE1Q9P212 2302 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 J3KTA2 159 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 NME4O00746 187 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 NPPAP01160 153 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 IFNA14P01570 189 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 TP53P04637 393 aaPredicted RBP8.41□□□□□ -1.06
USP54-207ENST00000451492 PATE4P0C8F1 98 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 NCK1P16333 377 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 KDELR2P33947 212 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 SEC24CP53992 1094 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 GYS2P54840 703 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 CLRN1P58418 232 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 SNRPD2P62316 118 aaKnown RBP8.41□□□□□ -1.06
USP54-207ENST00000451492 PPP2R2BQ00005 443 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 LIPEQ05469 1076 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 CHRNB3Q05901 458 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 RPL18Q07020 188 aaKnown RBP8.41□□□□□ -1.06
USP54-207ENST00000451492 SNTB2Q13425 540 aaKnown RBP8.41□□□□□ -1.06
USP54-207ENST00000451492 TOP3AQ13472 1001 aaPredicted RBP8.41□□□□□ -1.06
USP54-207ENST00000451492 GSG1Q2KHT4 349 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 CLEC2AQ6UVW9 174 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 TREML1Q86YW5 311 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 ANKK1Q8NFD2 765 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 RP9Q8TA86 221 aaKnown RBP8.41□□□□□ -1.06
USP54-207ENST00000451492 MAGEE2Q8TD90 523 aaPredicted RBP8.41□□□□□ -1.06
USP54-207ENST00000451492 TMEM239Q8WW34 195 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 ZNF566Q969W8 418 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 SGTBQ96EQ0 304 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 MS4A3Q96HJ5 214 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 MPP4Q96JB8 637 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 SORCS2Q96PQ0 1159 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 FOXB1Q99853 325 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 RHNO1Q9BSD3 238 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 KATNB1Q9BVA0 655 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 PCDHAC1Q9H158 963 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 CA10Q9NS85 328 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 RIMS3Q9UJD0 308 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 PMF1-BGLAPU3KQ54 211 aa8.41□□□□□ -1.06
USP54-207ENST00000451492 YLPM1P49750 1951 aaKnown RBP8.41□□□□□ -1.06
USP54-207ENST00000451492 IGHV2OR16-5A0A0B4J2B6 119 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 LOC102725191A0A1B0GVB3 256 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 A0A1W2PRG6 482 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 SH3PXD2BA1X283 911 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 CXCR6O00574 342 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 SLC22A2O15244 555 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 CCDC22O60826 627 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 OR7A10O76100 309 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 OR5F1O95221 314 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 RAB36O95755 333 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 SERPINA1P01009 418 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 IGKV3-15P01624 115 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 MT-ND1P03886 318 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 OR4A8P0C604 315 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 ASAH2BP0C7U1 165 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 CBR1P16152 277 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 FUT4P22083 530 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 AQP2P41181 271 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 ARPINQ7Z6K5 226 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 IGFN1Q86VF2 1251 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 SLC15A3Q8IY34 581 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 SVOPLQ8N434 492 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 SYT14Q8NB59 555 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 RBM15BQ8NDT2 890 aaKnown RBP8.4□□□□□ -1.06
USP54-207ENST00000451492 MOSPD2Q8NHP6 518 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms