RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 MCCC2Q9HCC0 563 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 TBC1D23Q9NUY8 699 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 IL20Q9NYY1 176 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 HIF3AQ9Y2N7 669 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 NOSIPQ9Y314 301 aaKnown RBP11.56□□□□□ -0.56
VPS33A-202ENST00000451053 GMPPBQ9Y5P6 360 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 LOC102725191A0A1B0GVB3 256 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 NKX2-6A6NCS4 301 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 EEF1E1-BLOC1S5C9J1V9 151 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 EEF1E1O43324 174 aaKnown RBP11.55□□□□□ -0.56
VPS33A-202ENST00000451053 RNF13O43567 381 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 DENRO43583 198 aaKnown RBP11.55□□□□□ -0.56
VPS33A-202ENST00000451053 NDUFB2O95178 105 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 SOX14O95416 240 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 F13BP05160 661 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 ZNF43P17038 809 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 AGAP20933 346 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 POU1F1P28069 291 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 SLC6A6P31641 620 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 CLDN17P56750 224 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 FXYD6P3P58550 94 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 CDC42P60953 191 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 MED21Q13503 144 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 C1DQ13901 141 aaKnown RBP11.55□□□□□ -0.56
VPS33A-202ENST00000451053 PTGES3Q15185 160 aaKnown RBP11.55□□□□□ -0.56
VPS33A-202ENST00000451053 SLC27A4Q6P1M0 643 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 PXKQ7Z7A4 578 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 IGFN1Q86VF2 1251 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 WDFY1Q8IWB7 410 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 DEPDC4Q8N2C3 294 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 CA5BP1Q8WTZ4 195 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 TMEM45BQ96B21 275 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 ANKRD60Q9BZ19 345 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 OR52D1Q9H346 318 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 PIGMQ9H3S5 423 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 SLC25A19Q9HC21 320 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 FANCFQ9NPI8 374 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 MED29Q9NX70 200 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 PROCRQ9UNN8 238 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 BAIAP2Q9UQB8 552 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 SIGLEC7Q9Y286 467 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 LRCH1Q9Y2L9 728 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 NOX1Q9Y5S8 564 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 HSPE1-MOB4S4R3N1 261 aa11.55□□□□□ -0.56
VPS33A-202ENST00000451053 ZAR1LA6NP61 321 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 PTP4A3O75365 173 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 CLDN14O95500 239 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 TP53P04637 393 aaPredicted RBP11.54□□□□□ -0.56
VPS33A-202ENST00000451053 CD8BP10966 210 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 SLC25A35Q3KQZ1 300 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 ALG10Q5BKT4 473 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 CASP12Q6UXS9 341 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 TFAP2EQ6VUC0 442 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 AAED1Q7RTV5 226 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 LUZP2Q86TE4 346 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 KIF18BQ86Y91 864 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 C8orf59Q8N0T1 100 aaPredicted RBP11.54□□□□□ -0.56
VPS33A-202ENST00000451053 ZNF610Q8N9Z0 462 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 LRRC75AQ8NAA5 344 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 ANKK1Q8NFD2 765 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 OR2T33Q8NG76 320 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 TXNDC15Q96J42 360 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 ZNF570Q96NI8 536 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 TSSK6Q9BXA6 273 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 ENKD1Q9H0I2 346 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 EGLN3Q9H6Z9 239 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 PLSCR4Q9NRQ2 329 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 INIPQ9NRY2 104 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 IMPAD1Q9NX62 359 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 JKAMPQ9P055 326 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 PRSS50Q9UI38 385 aa11.54□□□□□ -0.56
VPS33A-202ENST00000451053 NDRG4Q9ULP0 352 aaKnown RBP11.54□□□□□ -0.56
VPS33A-202ENST00000451053 RELNP78509 3460 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 MCIDASD6RGH6 385 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 E9PQ18 207 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 MSTNO14793 375 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 MPZL2O60487 215 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 MRPL33O75394 65 aaKnown RBP11.53□□□□□ -0.56
VPS33A-202ENST00000451053 IGHV3-9P01782 118 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 HMGN1P05114 100 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 IFNGR1P15260 489 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 MYF6P23409 242 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 GGT2P36268 569 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 POLR2IP36954 125 aaKnown RBP11.53□□□□□ -0.56
VPS33A-202ENST00000451053 OR3A2P47893 321 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 GIPRP48546 466 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 SELENOPP49908 381 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 ASCL1P50553 236 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 CDK5Q00535 292 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 MELKQ14680 651 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 GINS1Q14691 196 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 ZNF691Q5VV52 312 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 SLX4IPQ5VYV7 408 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 KRT80Q6KB66 452 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 NIPAL3Q6P499 406 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 ZNF474Q6S9Z5 364 aaPredicted RBP11.53□□□□□ -0.56
VPS33A-202ENST00000451053 THSD4Q6ZMP0 1018 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 USP51Q70EK9 711 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 SLC35D2Q76EJ3 337 aa11.53□□□□□ -0.56
VPS33A-202ENST00000451053 ZNF100Q8IYN0 542 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms