RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 NDNFQ8TB73 568 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 SPRYD4Q8WW59 207 aaPredicted RBP12.79□□□□□ -0.36
USP39-207ENST00000450066 DTNBP1Q96EV8 351 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 AGAP4Q96P64 663 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 MYCBPQ99417 103 aaPredicted RBP12.79□□□□□ -0.36
USP39-207ENST00000450066 SRA1Q9HD15 236 aaKnown RBP12.79□□□□□ -0.36
USP39-207ENST00000450066 NPIPA5E9PKD4 350 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 SULT2B1O00204 365 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 DCTN6O00399 190 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 NKX2-8O15522 239 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 TFP02787 698 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 RFPL3SP0C7P2 107 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 PSMA1P25786 263 aaKnown RBP12.79□□□□□ -0.36
USP39-207ENST00000450066 PYCR1P32322 319 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 CAPZA2P47755 286 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 P2RY4P51582 365 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 B3GALT5-AS1P59052 145 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 SLC35A1P78382 337 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 HSF1Q00613 529 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 BDH1Q02338 343 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 ZNF85Q03923 595 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 TOMM20Q15388 145 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 FAM205BPQ63HN1 556 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 GDPGP1Q6ZNW5 385 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 PM20D2Q8IYS1 436 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 OR14L1PQ8NHC6 308 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 UFD1Q92890 307 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 CHCHD6Q9BRQ6 235 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 ISG20L2Q9H9L3 353 aaKnown RBP12.79□□□□□ -0.36
USP39-207ENST00000450066 BABAM2Q9NXR7 383 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 PLA2G3Q9NZ20 509 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 NPIPA1Q9UND3 350 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 PTPRZ1P23471 2315 aaPredicted RBP12.78□□□□□ -0.36
USP39-207ENST00000450066 LOC100506127A0A0U1RQW1 187 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 PINLYPA6NC86 204 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 GJE1A6NN92 205 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 SEC14L5O43304 696 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 LALBAP00709 142 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 IFNGR1P15260 489 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 NAA10P41227 235 aaPredicted RBP12.78□□□□□ -0.36
USP39-207ENST00000450066 POU3F1Q03052 451 aaPredicted RBP12.78□□□□□ -0.36
USP39-207ENST00000450066 NHLRC1Q6VVB1 395 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 SLC35D2Q76EJ3 337 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 ZBTB46Q86UZ6 589 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 SLC35F2Q8IXU6 374 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 OR2M7Q8NG81 312 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 SMAP2Q8WU79 429 aaPredicted RBP12.78□□□□□ -0.36
USP39-207ENST00000450066 ASB10Q8WXI3 467 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 ZHX1-C8orf76Q96EF9 292 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 NUAK2Q9H093 628 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 B3GAT1Q9P2W7 334 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 STUB1Q9UNE7 303 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 FKBP7Q9Y680 259 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 MED13Q9UHV7 2174 aa12.78□□□□□ -0.36
USP39-207ENST00000450066 SLC22A23A1A5C7 686 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 FAM171A2A8MVW0 826 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 SELENOFO60613 162 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 MT-ND5P03915 603 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 PRKAR1AP10644 381 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 UGT2B10P36537 528 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 TUBA1BP68363 451 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 SRSF6Q13247 344 aaKnown RBP12.77□□□□□ -0.36
USP39-207ENST00000450066 MELKQ14680 651 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 CRTC2Q53ET0 693 aaPredicted RBP12.77□□□□□ -0.36
USP39-207ENST00000450066 TUBA1AQ71U36 451 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 SLC16A9Q7RTY1 509 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 KLBQ86Z14 1044 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 FAM83FQ8NEG4 500 aaPredicted RBP12.77□□□□□ -0.36
USP39-207ENST00000450066 KCNE4Q8WWG9 221 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 CENPOQ9BU64 300 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 OR2B2Q9GZK3 357 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 CNTRLQ7Z7A1 2325 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 ZFHX4Q86UP3 3567 aa12.77□□□□□ -0.36
USP39-207ENST00000450066 LOC102725191A0A1B0GVB3 256 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 OR5H15A6NDH6 313 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 A6NL46 340 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 AQP7P3A6NL99 342 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 VGLL3A8MV65 326 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 AHCYL1O43865 530 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 GPX5O75715 221 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 GDF1P27539 372 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 PEX19P40855 299 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 CRYBB2P43320 205 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 CENPAP49450 140 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 HCCSP53701 268 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 RPS3AP61247 264 aaKnown RBP12.77□□□□□ -0.37
USP39-207ENST00000450066 ACTA2P62736 377 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 ACTG2P63267 376 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 H3F3AP84243 136 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 RUNX1T1Q06455 604 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 CLN3Q13286 438 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 TMEM225Q6GV28 225 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 LYPD4Q6UWN0 246 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 USP43Q70EL4 1123 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 YRDCQ86U90 279 aaKnown RBP12.77□□□□□ -0.37
USP39-207ENST00000450066 ZNF511Q8NB15 262 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 MDS2Q8NDY4 140 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 DYNC2LI1Q8TCX1 351 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 RNF32Q9H0A6 362 aa12.77□□□□□ -0.37
USP39-207ENST00000450066 B9D1Q9UPM9 204 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms