RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ZNF99A8MXY4 864 aaPredicted RBP6.54□□□□□ -1.36
LINC01961-201ENST00000449954 PDPK1O15530 556 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 ZNF208O43345 1280 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 UPK3AO75631 287 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 CYP7B1O75881 506 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 RAB36O95755 333 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 GPIP06744 558 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 OR8G3PP0DMU2 310 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 CD79AP11912 226 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 IMPDH2P12268 514 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 DRD4P21917 467 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 CRABP2P29373 138 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 STX2P32856 288 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 CRHR1P34998 444 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 MSX2P35548 267 aaPredicted RBP6.54□□□□□ -1.36
LINC01961-201ENST00000449954 HTR3AP46098 478 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 EFNB2P52799 333 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 KRTAP10-11P60412 298 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 BTG1P62324 171 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 GNB2P62879 340 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 C2orf80Q0P641 193 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 PRSS53Q2L4Q9 553 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 FAM83EQ2M2I3 478 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 NSUN5P1Q3KNT7 163 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 DCST2Q5T1A1 773 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 CCDC137Q6PK04 289 aaKnown RBP6.54□□□□□ -1.36
LINC01961-201ENST00000449954 ZNF551Q7Z340 670 aaPredicted RBP6.54□□□□□ -1.36
LINC01961-201ENST00000449954 DDIASQ8IXT1 998 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 MUC20Q8N307 709 aaPredicted RBP6.54□□□□□ -1.36
LINC01961-201ENST00000449954 KLHDC1Q8N7A1 406 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 CDC26Q8NHZ8 85 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 KIF18AQ8NI77 898 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 ZNF563Q8TA94 476 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 ZNF519Q8TB69 540 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 GRK7Q8WTQ7 553 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 C11orf40Q8WZ69 217 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 CDKL2Q92772 493 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 DPF1Q92782 380 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 MAGOHBQ96A72 148 aaKnown RBP6.54□□□□□ -1.36
LINC01961-201ENST00000449954 CHMP6Q96FZ7 201 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 PLEKHA8Q96JA3 519 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 ZNF75AQ96N20 296 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 TSPAN32Q96QS1 320 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 CPNE1Q99829 537 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 EBPLQ9BY08 206 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 GPR61Q9BZJ8 451 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 PIGUQ9H490 435 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 A4GALTQ9NPC4 353 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 SIRT5Q9NXA8 310 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 PCTPQ9UKL6 214 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 RCE1Q9Y256 329 aa6.54□□□□□ -1.36
LINC01961-201ENST00000449954 HUWE1Q7Z6Z7 4374 aaKnown RBP6.54□□□□□ -1.36
LINC01961-201ENST00000449954 PLSCR5A0PG75 271 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 ANKRD61A6NGH8 418 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 P2RY10O00398 339 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 DNALI1O14645 258 aaPredicted RBP6.53□□□□□ -1.36
LINC01961-201ENST00000449954 SLC43A1O75387 559 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 CSTAP01040 98 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 IGHV1-46P01743 117 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 HLA-HP01893 362 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 KRT6AP02538 564 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 KRT6BP04259 564 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 ADH4P08319 380 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 UBTFL6P0CB48 400 aaPredicted RBP6.53□□□□□ -1.36
LINC01961-201ENST00000449954 UROSP10746 265 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 EPHA3P29320 983 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 MDH2P40926 338 aaKnown RBP6.53□□□□□ -1.36
LINC01961-201ENST00000449954 ETV4P43268 484 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 KRT6CP48668 564 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 FGF12P61328 243 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 CAMK2DQ13557 499 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 CEACAM16Q2WEN9 425 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 PDZK1Q5T2W1 519 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 TMEM225Q6GV28 225 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 SLC35E4Q6ICL7 350 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 FAM71E1Q6IPT2 247 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 ZNF774Q6NX45 483 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 CREB3L2Q70SY1 520 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 LRRC28Q86X40 367 aaPredicted RBP6.53□□□□□ -1.36
LINC01961-201ENST00000449954 GPR137CQ8N3F9 429 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 TMEM99Q8N816 258 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 DTX3Q8N9I9 347 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 CDS1Q92903 461 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 OTUB1Q96FW1 271 aaPredicted RBP6.53□□□□□ -1.36
LINC01961-201ENST00000449954 ZNF764Q96H86 408 aaPredicted RBP6.53□□□□□ -1.36
LINC01961-201ENST00000449954 MAP6Q96JE9 813 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 ACPTQ9BZG2 426 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 CNTD2Q9H8S5 307 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 GPR35Q9HC97 309 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 CPSF2Q9P2I0 782 aaKnown RBP6.53□□□□□ -1.36
LINC01961-201ENST00000449954 RNF14Q9UBS8 474 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 CGGBP1Q9UFW8 167 aaPredicted RBP6.53□□□□□ -1.36
LINC01961-201ENST00000449954 FOXJ3Q9UPW0 622 aa6.53□□□□□ -1.36
LINC01961-201ENST00000449954 TMEM82A0PJX8 343 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 CEACAM18A8MTB9 384 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 STX16-NPEPL1H3BU86 382 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 STX16O14662 325 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 RAD51CO43502 376 aa6.52□□□□□ -1.37
LINC01961-201ENST00000449954 JTBO76095 146 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms