RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MELKQ14680 651 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 GABRA6Q16445 453 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 PXKQ7Z7A4 578 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 FAM86B1Q8N7N1 296 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 OR6N1Q8NGY5 312 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 PIGTQ969N2 578 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 OR2M2Q96R28 347 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 EMC6Q9BV81 110 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 GORASP2Q9H8Y8 452 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 AMDHD2Q9Y303 409 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 FAM32AQ9Y421 112 aaKnown RBP12.78□□□□□ -0.36
USP39-206ENST00000448971 RNF115Q9Y4L5 304 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 ENPP4Q9Y6X5 453 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 PRR14LQ5THK1 2151 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 MXRA5Q9NR99 2828 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 SLC35F4A4IF30 521 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 MCIDASD6RGH6 385 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 M0R3G1 203 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 SMPD2O60906 423 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 ZNF432O94892 652 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 SAGP10523 405 aaPredicted RBP12.77□□□□□ -0.37
USP39-206ENST00000448971 IFNGR1P15260 489 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 FUT1P19526 365 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 LOXP28300 417 aaPredicted RBP12.77□□□□□ -0.37
USP39-206ENST00000448971 PCSK6P29122 969 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 BIDP55957 195 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 BSPH1Q075Z2 132 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 CAMK2DQ13557 499 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 FXNQ16595 210 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 SPATS1Q496A3 300 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 FGD3Q5JSP0 725 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 NCMAPQ5T1S8 102 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 BRICD5Q6PL45 260 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 ZNF730Q6ZMV8 503 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 SLC35D2Q76EJ3 337 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 TRPM8Q7Z2W7 1104 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 NRMQ8IXM6 262 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 TMEM123Q8N131 208 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 OR1K1Q8NGR3 316 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 SPATA3Q8NHX4 192 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 MCUR1Q96AQ8 359 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 Q96MF0 132 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 BDH2Q9BUT1 245 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 ULBP2Q9BZM5 246 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 B3GAT2Q9NPZ5 323 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 SLC17A5Q9NRA2 495 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 MAN2C1Q9NTJ4 1040 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 NPAP1Q9NZP6 1156 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 CD300AQ9UGN4 299 aa12.77□□□□□ -0.37
USP39-206ENST00000448971 MAGED1Q9Y5V3 778 aaPredicted RBP12.77□□□□□ -0.37
USP39-206ENST00000448971 M0R1B8 84 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 FFAR1O14842 300 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 PDE5AO76074 875 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 IGF2P01344 180 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 ZNF83P51522 516 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 SH3BGRP55822 239 aaPredicted RBP12.76□□□□□ -0.37
USP39-206ENST00000448971 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
USP39-206ENST00000448971 RPL18Q07020 188 aaKnown RBP12.76□□□□□ -0.37
USP39-206ENST00000448971 CEACAM16Q2WEN9 425 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 TBRG1Q3YBR2 411 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 HIKESHIQ53FT3 197 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 ADAM5Q6NVV9 412 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 KLHL17Q6TDP4 642 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 SEZ6L2Q6UXD5 910 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 RINLQ6ZS11 566 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 LINGO2Q7L985 606 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 RRM2BQ7LG56 351 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 ARHGAP24Q8N264 748 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 ACOT11Q8WXI4 607 aaPredicted RBP12.76□□□□□ -0.37
USP39-206ENST00000448971 BPIFA2Q96DR5 249 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 TXNDC15Q96J42 360 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 MUS81Q96NY9 551 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 CRLF2Q9HC73 371 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 TAS2R5Q9NYW4 299 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 SLC25A15Q9Y619 301 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 RAI1Q7Z5J4 1906 aaPredicted RBP12.76□□□□□ -0.37
USP39-206ENST00000448971 FREM1Q5H8C1 2179 aa12.76□□□□□ -0.37
USP39-206ENST00000448971 A0A096LPE4 126 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 A0A1W2PPZ6 126 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 A0A1W2PRG6 482 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 TRIM64A6NGJ6 449 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 TRIM64BA6NI03 449 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 SMAD7O15105 426 aaKnown RBP12.75□□□□□ -0.37
USP39-206ENST00000448971 SEC14L2O76054 403 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 DIRAS1O95057 198 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 PRSS23O95084 383 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 ABCA1O95477 2261 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 STAMBPO95630 424 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 WNT11O96014 354 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 PLAUP00749 431 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 F13BP05160 661 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 FABP3P05413 133 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 H1F0P07305 194 aaKnown RBP12.75□□□□□ -0.37
USP39-206ENST00000448971 ITGA2P17301 1181 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 RHCEP18577 417 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 ATP6V1B2P21281 511 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 FUT4P22083 530 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 AQP2P41181 271 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 CSNK1A1P48729 337 aa12.75□□□□□ -0.37
USP39-206ENST00000448971 PRPS1P60891 318 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms