RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 GTF2IRD2Q86UP8 949 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 MCEMP1Q8IX19 187 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 SLC37A3Q8NCC5 494 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 ZNF519Q8TB69 540 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 FAM57AQ8TBR7 257 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 LRR1Q96L50 414 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 NMNAT3Q96T66 252 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 EMC6Q9BV81 110 aa17.39■□□□□ 0.37
SGCE-207ENST00000447873 ZNF726A6NNF4 738 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 PRR23D1E9PI22 279 aaPredicted RBP17.38■□□□□ 0.37
SGCE-207ENST00000447873 TGM6O95932 706 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 PRR23D2P0DMB1 279 aaPredicted RBP17.38■□□□□ 0.37
SGCE-207ENST00000447873 EDN3P14138 238 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 GABRA1P14867 456 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 CDKN2AP42771 156 aaKnown RBP17.38■□□□□ 0.37
SGCE-207ENST00000447873 ITGADQ13349 1161 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 CRMP1Q14194 572 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 CPOQ8IVL8 374 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 FAM26EQ8N5C1 309 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 CYB561A3Q8NBI2 242 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 FBLIM1Q8WUP2 373 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 APH1BQ8WW43 257 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 ZNF775Q96BV0 537 aaPredicted RBP17.38■□□□□ 0.37
SGCE-207ENST00000447873 ADAD1Q96M93 576 aaKnown RBP17.38■□□□□ 0.37
SGCE-207ENST00000447873 Q96MT0 163 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 FN3KQ9H479 309 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 CLN6Q9NWW5 311 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 EMC3Q9P0I2 261 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 CLCF1Q9UBD9 225 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 FLVCR1Q9Y5Y0 555 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 EPG5Q9HCE0 2579 aa17.38■□□□□ 0.37
SGCE-207ENST00000447873 ZGRF1Q86YA3 2104 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 SLC35F4A4IF30 521 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 FAM183AA6NL82 134 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 FIGNL2A6NMB9 653 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 GPR171O14626 319 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 AKAP8O43823 692 aaKnown RBP17.37■□□□□ 0.37
SGCE-207ENST00000447873 WDR1O75083 606 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 RBPJQ06330 500 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 ACSF3Q4G176 576 aaPredicted RBP17.37■□□□□ 0.37
SGCE-207ENST00000447873 PLBD1Q6P4A8 553 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 CXXC5Q7LFL8 322 aaKnown RBP17.37■□□□□ 0.37
SGCE-207ENST00000447873 CD163Q86VB7 1156 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 NPEPL1Q8NDH3 523 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 OR6X1Q8NH79 312 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 CPT1CQ8TCG5 803 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 ZNF385AQ96PM9 386 aaKnown RBP17.37■□□□□ 0.37
SGCE-207ENST00000447873 HINT3Q9NQE9 182 aaKnown RBP17.37■□□□□ 0.37
SGCE-207ENST00000447873 IGSF10Q6WRI0 2623 aa17.37■□□□□ 0.37
SGCE-207ENST00000447873 IGKV3D-15A0A087WSY6 115 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 H7C1C5 153 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 PRRG2O14669 202 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 WBP4O75554 376 aaKnown RBP17.36■□□□□ 0.37
SGCE-207ENST00000447873 RENP00797 406 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 PTGER4P35408 488 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 LCN6P62502 163 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 RUNX1T1Q06455 604 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 CAMK2DQ13557 499 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 OCLNQ16625 522 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 SLC25A30Q5SVS4 291 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 MEDAGQ5VYS4 303 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 ZIC4Q8N9L1 334 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 SLC25A44Q96H78 314 aaPredicted RBP17.36■□□□□ 0.37
SGCE-207ENST00000447873 CALHM2Q9HA72 323 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 DNAJC27Q9NZQ0 273 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 H2AFY2Q9P0M6 372 aaPredicted RBP17.36■□□□□ 0.37
SGCE-207ENST00000447873 ING1Q9UK53 422 aaPredicted RBP17.36■□□□□ 0.37
SGCE-207ENST00000447873 PRSS37A4D1T9 235 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 OR6C68A6NDL8 312 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 IGHG1P01857 330 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 FMO3P31513 532 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 TEKQ02763 1124 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 C6orf141Q5SZD1 244 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 BCDIN3DQ7Z5W3 292 aaKnown RBP17.36■□□□□ 0.37
SGCE-207ENST00000447873 TUSC5Q8IXB3 177 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 ZNF786Q8N393 782 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 SYT14Q8NB59 555 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 HDAC2Q92769 488 aaKnown RBP17.36■□□□□ 0.37
SGCE-207ENST00000447873 ZNF566Q969W8 418 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 DDOQ99489 341 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 MED20Q9H944 212 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 RNF122Q9H9V4 155 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 BCO1Q9HAY6 547 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 CLEC4AQ9UMR7 237 aa17.36■□□□□ 0.37
SGCE-207ENST00000447873 MED12LQ86YW9 2145 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 RP1L1Q8IWN7 2480 aaPredicted RBP17.35■□□□□ 0.37
SGCE-207ENST00000447873 SNTNA6NMZ2 147 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 KDM4EB2RXH2 506 aaPredicted RBP17.35■□□□□ 0.37
SGCE-207ENST00000447873 M0R3G1 203 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 ATXN7O15265 892 aaPredicted RBP17.35■□□□□ 0.37
SGCE-207ENST00000447873 ENTPD6O75354 484 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 TRMUO75648 421 aaKnown RBP17.35■□□□□ 0.37
SGCE-207ENST00000447873 SMN1Q16637 294 aaKnown RBP17.35■□□□□ 0.37
SGCE-207ENST00000447873 TMEM201Q5SNT2 666 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 NXNL2Q5VZ03 156 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 CARD17Q5XLA6 110 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 NSUN5P2Q63ZY6 315 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 LAIR2Q6ISS4 152 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 NIPAL3Q6P499 406 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 RPTNQ6XPR3 784 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms