RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 EXD3Q8N9H8 876 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR6N2Q8NGY6 317 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 DDIT4LQ96D03 193 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 SPACA9Q96E40 222 aaPredicted RBP8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 ATF6BQ99941 703 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF160Q9HCG1 818 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 MALT1Q9UDY8 824 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 PISDQ9UG56 409 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 LAMP5Q9UJQ1 280 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 FBXL2Q9UKC9 423 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 WIF1Q9Y5W5 379 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 HS3ST3B1Q9Y662 390 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 V9GYH0 126 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 COL5A1P20908 1838 aaPredicted RBP8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 LOC102723996A0A087X1L8 192 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 DXOO77932 396 aaKnown RBP8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR8G3PP0DMU2 310 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 COX6A1P12074 109 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 PTGDSP41222 190 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 CAPZA2P47755 286 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 MTNR1BP49286 362 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 TPTEP56180 551 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR10A3P58181 314 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 FOXK1P85037 733 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 CAMK2BQ13554 666 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 CDK5R1Q15078 307 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 SF3A2Q15428 464 aaKnown RBP8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 NTRK2Q16620 822 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 PYDC2Q56P42 97 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 RPL22L1Q6P5R6 122 aaKnown RBP8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 DPY19L4Q7Z388 723 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 MS4A15Q8N5U1 240 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 YIPF7Q8N8F6 280 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR2Y1Q8NGV0 311 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 NXPE2Q96DL1 559 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 SMIM19Q96E16 107 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 RNF32Q9H0A6 362 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF700Q9H0M5 742 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 TSPAN10Q9H1Z9 355 aaPredicted RBP8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 CDCP1Q9H5V8 836 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 ING1Q9UK53 422 aaPredicted RBP8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 IKZF2Q9UKS7 526 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 PADI1Q9ULC6 663 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 KLHDC2Q9Y2U9 406 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 UGT2A1Q9Y4X1 527 aa8.59□□□□□ -1.03
COL6A4P1-201ENST00000446690 NSG1A0A0A6YYJ2 146 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 PRSS37A4D1T9 235 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 PRR32B1ATL7 298 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 OGG1O15527 345 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 TRIM3O75382 744 aaPredicted RBP8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 AKR7A3O95154 331 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 CD53P19397 219 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 TCN2P20062 427 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 OTX2P32243 289 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 SUMO3P55854 103 aaPredicted RBP8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 DEFA1P59665 94 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 DEFA3P59666 94 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 ZNF79Q15937 498 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 ETFDHQ16134 617 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 EXT1Q16394 746 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 BAK1Q16611 211 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 EEF1A1P5Q5VTE0 462 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 MZT2AQ6P582 158 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 DBX2Q6ZNG2 339 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 RAB11FIP2Q7L804 512 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 FAM220AQ7Z4H9 259 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 NR2C2APQ86WQ0 139 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 TIGD4Q8IY51 512 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 IMMP1LQ96LU5 166 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 JSRP1Q96MG2 331 aaPredicted RBP8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 C5orf34Q96MH7 638 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 WDFY2Q96P53 400 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 STRADBQ9C0K7 418 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 TXNIPQ9H3M7 391 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 MRPL39Q9NYK5 338 aaKnown RBP8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 FAM25AB3EWG3 89 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 FAM25CB3EWG5 89 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 FAM25GB3EWG6 89 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 B4E171 279 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 G3V3Y1 287 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 MS4A18H0YCH9 400 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 TP53I11O14683 189 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 EFNA2O43921 213 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 SERPINA3P01011 423 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 CYC1P08574 325 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 TACSTD2P09758 323 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 JMJD7P0C870 316 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 ZNF883P0CG24 379 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 MSX1P28360 303 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 TSPAN7P41732 249 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 PPP3R1P63098 170 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 IFITM2Q01629 132 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 HSF2Q03933 536 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 TLE3Q04726 772 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 PUDPQ08623 228 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 TAB1Q15750 504 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 MS4A18Q3C1V0 323 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 C5orf46Q6UWT4 87 aa8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 H1FNTQ75WM6 255 aaPredicted RBP8.58□□□□□ -1.04
COL6A4P1-201ENST00000446690 SYT9Q86SS6 491 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms