RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 POU3F4P49335 361 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 PRICKLE4Q2TBC4 344 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 TMEM240Q5SV17 173 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 ARSKQ6UWY0 536 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 IDO2Q6ZQW0 420 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 FOXRED2Q8IWF2 684 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 OR10H5Q8NGA6 315 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 ZNF417Q8TAU3 575 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 FGF14Q92915 247 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 OR1F2PQ96R84 312 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 OR10A5Q9H207 317 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 LYRM4Q9HD34 91 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 TEX51A0A1B0GUA7 166 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 KLF4O43474 513 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 SULT1A3P0DMM9 295 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 SULT1A4P0DMN0 295 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 S100A11P31949 105 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 OR1D4P47884 311 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 TFF2Q03403 129 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 FAM53BQ14153 422 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 GK2Q14410 553 aaPredicted RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 MEP1BQ16820 701 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 FCRL6Q6DN72 434 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 OR13H1Q8NG92 308 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 SLC6A7Q99884 636 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 PPA2Q9H2U2 334 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 IFT46Q9NQC8 304 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 DNAJB12Q9NXW2 375 aaKnown RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 CGGBP1Q9UFW8 167 aaPredicted RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 MRTO4Q9UKD2 239 aaKnown RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 SLC22A13Q9Y226 551 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 ENTPD2Q9Y5L3 495 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 F5H0A9 414 aaPredicted RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 NGFRP08138 427 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 CDKN2AP42771 156 aaKnown RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 GLT8D1Q68CQ7 371 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 OR10K2Q6IF99 312 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 ZCCHC12Q6PEW1 402 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 TSSK4Q6SA08 328 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 GSG1LQ6UXU4 331 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 SHISA6Q6ZSJ9 500 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 GPR137Q96N19 417 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 POLMQ9NP87 494 aaPredicted RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 CA10Q9NS85 328 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 POMT2Q9UKY4 750 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 TMEM14AQ9Y6G1 99 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 hCG_1807616A0A1W2PRN6 198 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 OR14I1A6ND48 311 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 MPC2O95563 127 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 ACSM4P0C7M7 580 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 GP1BBP13224 206 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 IFNGR1P15260 489 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 NR0B1P51843 470 aaKnown RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 HTRA4P83105 476 aaPredicted RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 KLF9Q13886 244 aaPredicted RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 RBMS2Q15434 407 aaKnown RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 ALG11Q2TAA5 492 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 SLC6A19Q695T7 634 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 ZNF101Q8IZC7 436 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 OR10AC1Q8NH08 325 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 OR14A16Q8NHC5 309 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 C16orf52Q8NHV5 167 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 RLN3Q8WXF3 142 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 VWCEQ96DN2 955 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 GPER1Q99527 375 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 PRODH2Q9UF12 536 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 TCF20Q9UGU0 1960 aaKnown RBP10.84□□□□□ -0.67
MSH6-204ENST00000445503 CCSO14618 274 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 CBX7O95931 251 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 AKAIN1P0CW23 69 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 THEGLP0DJG4 465 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 FOSL1P15407 271 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 AKR1C4P17516 323 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 ENPP1P22413 925 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 GPR139Q6DWJ6 353 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 TMUB2Q71RG4 321 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 ZNF546Q86UE3 836 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 LIX1LQ8IVB5 337 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 ACBD4Q8NC06 268 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 FAM174AQ8TBP5 190 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 NT5CQ8TCD5 201 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 POTEKPQ9BYX7 375 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 WDR76Q9H967 626 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 SEC61A2Q9H9S3 476 aa10.84□□□□□ -0.67
MSH6-204ENST00000445503 A0A087WV62 115 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 A0A0G2JK05 382 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 CTNSO60931 367 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 ZNF28P17035 718 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 POU3F2P20265 443 aaPredicted RBP10.83□□□□□ -0.68
MSH6-204ENST00000445503 S1PR1P21453 382 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 BTCP35070 178 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 NANOS3P60323 173 aaKnown RBP10.83□□□□□ -0.68
MSH6-204ENST00000445503 SEC61A1P61619 476 aaKnown RBP10.83□□□□□ -0.68
MSH6-204ENST00000445503 CLLU1Q5K131 121 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 RTL10Q7L3V2 364 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 KCTD20Q7Z5Y7 419 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 OR4C16Q8NGL9 310 aa10.83□□□□□ -0.68
MSH6-204ENST00000445503 BAHD1Q8TBE0 780 aaPredicted RBP10.83□□□□□ -0.68
MSH6-204ENST00000445503 LMX1AQ8TE12 382 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms