RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 WNT1P04628 370 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 KLK3P07288 261 aaPredicted RBP4.77□□□□□ -1.65
SCN11A-202ENST00000444237 ITGA5P08648 1049 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 SLC35G4P0C7Q5 338 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 F3P13726 295 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 EPHA2P29317 976 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 POLR2HP52434 150 aaKnown RBP4.77□□□□□ -1.65
SCN11A-202ENST00000444237 TAS2R46P59540 309 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 HNRNPKP61978 463 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCN11A-202ENST00000444237 CEBPEQ15744 281 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 TIGD5Q53EQ6 642 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 RTL6Q6ICC9 239 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 NIPAL3Q6P499 406 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 PAQR6Q6TCH4 344 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 TAS1R3Q7RTX0 852 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 OR2D3Q8NGH3 330 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 OR52E2Q8NGJ4 325 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 OR2AJ1Q8NGZ0 328 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 OR51A7Q8NH64 312 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 CXorf40AQ8TE69 158 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 MCHR2Q969V1 340 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 C5orf34Q96MH7 638 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 HCAR1Q9BXC0 346 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 OR51I2Q9H344 312 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 MOB1AQ9H8S9 216 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 TP53TG5Q9Y2B4 290 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 CDRT15L2A8MXV6 281 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 ANKRD66B4E2M5 251 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 UPK1AO00322 258 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 GSTZ1O43708 216 aaPredicted RBP4.77□□□□□ -1.65
SCN11A-202ENST00000444237 OR1F1O43749 312 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 GPR137BO60478 399 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 MAFKO60675 156 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 MPC2O95563 127 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 MT-CO2P00403 227 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 PDGFBP01127 241 aaPredicted RBP4.77□□□□□ -1.65
SCN11A-202ENST00000444237 ITGB2P05107 769 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 HBQ1P09105 142 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 OR5AC1P0C628 307 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 CCL5P13501 91 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 ARL3P36405 182 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 NOVA1P51513 510 aaKnown RBP4.77□□□□□ -1.65
SCN11A-202ENST00000444237 CCL23P55773 120 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 UBE2MP61081 183 aaKnown RBP4.77□□□□□ -1.65
SCN11A-202ENST00000444237 SURF2Q15527 256 aaPredicted RBP4.77□□□□□ -1.65
SCN11A-202ENST00000444237 Q499Y3 187 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 ALG10BQ5I7T1 473 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 LAMTOR1Q6IAA8 161 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 CNKSR3Q6P9H4 555 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 ZNF66Q6ZN08 573 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 LYG2Q86SG7 212 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 OR52B4Q8NGK2 314 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 OLIG1Q8TAK6 271 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 LKAAEAR1Q8TD35 194 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 GTF3AQ92664 365 aaKnown RBP4.77□□□□□ -1.65
SCN11A-202ENST00000444237 CDS1Q92903 461 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 RELTQ969Z4 430 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 CSNK1G1Q9HCP0 422 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 FKBP11Q9NYL4 201 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 LAMP3Q9UQV4 416 aa4.77□□□□□ -1.65
SCN11A-202ENST00000444237 TRAV1-2A0A0B4J238 106 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 A0A0U1RQK1 487 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 C2orf78A6NCI8 922 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 H3BSH0 61 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 PYCARD-AS1I3L0S3 204 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 CTDSPLO15194 276 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 SIGLEC5O15389 551 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 CST4P01036 141 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 HLA-DQB1P01920 261 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 IGFBP1P08833 259 aaPredicted RBP4.76□□□□□ -1.65
SCN11A-202ENST00000444237 NDUFB7P17568 137 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 NT5EP21589 574 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 CTHP32929 405 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 CD96P40200 585 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 ECI1P42126 302 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 CCINQ13939 588 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 IAH1Q2TAA2 248 aaPredicted RBP4.76□□□□□ -1.65
SCN11A-202ENST00000444237 RPS26P11Q5JNZ5 115 aaPredicted RBP4.76□□□□□ -1.65
SCN11A-202ENST00000444237 PHYHD1Q5SRE7 291 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 RNLSQ5VYX0 342 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 SLC16A14Q7RTX9 510 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 PRICKLE2Q7Z3G6 844 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 TRAPPC6BQ86SZ2 158 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 ZNF429Q86V71 674 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 MISPQ8IVT2 679 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 CMTM4Q8IZR5 234 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 OR5AP2Q8NGF4 316 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 CD200R1Q8TD46 325 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 ASB17Q8WXJ9 295 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 ISOC2Q96AB3 205 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 RBMXL1Q96E39 390 aaKnown RBP4.76□□□□□ -1.65
SCN11A-202ENST00000444237 FBXO17Q96EF6 278 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 NRIP2Q9BQI9 281 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 PCED1AQ9H1Q7 454 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 SRMSQ9H3Y6 488 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 TMEM38AQ9H6F2 299 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 PADI1Q9ULC6 663 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 TNRC6CQ9HCJ0 1690 aaKnown RBP4.76□□□□□ -1.65
SCN11A-202ENST00000444237 B4DEV8 164 aa4.76□□□□□ -1.65
SCN11A-202ENST00000444237 UBE2CO00762 179 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms