RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ZNF454Q8N9F8 522 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 NPRL2Q8WTW4 380 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 NINJ1Q92982 152 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 NIPSNAP1Q9BPW8 284 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 SLC30A2Q9BRI3 323 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 NDRG3Q9UGV2 375 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 SIP14410 1827 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 H3BUI4 141 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 MRPL19P49406 292 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF117Q03924 483 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 FAPQ12884 760 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 RSU1Q15404 277 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 PIWIL3Q7Z3Z3 882 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 OR8H3Q8N146 312 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 MMP25Q9NPA2 562 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 ACOT13Q9NPJ3 140 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 SLC6A13Q9NSD5 602 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 PAK1IP1Q9NWT1 392 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 SPTBP11277 2137 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 ACKR1Q16570 336 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 MPEG1Q2M385 716 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 ESPNLQ6ZVH7 1005 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 DPY19L4Q7Z388 723 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 ROBO4Q8WZ75 1007 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 SARGQ9BW04 601 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 FN3KQ9H479 309 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 VSX1Q9NZR4 365 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 TMEM72A0PK05 275 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 BOLA2-SMG1P6H3BVE0 249 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 SRD5A2P31213 254 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 SOX8P57073 446 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF91Q05481 1191 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 FUT7Q11130 342 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 ATAD3CQ5T2N8 411 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 FAM57BQ71RH2 274 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 MDGA2Q7Z553 956 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 CCDC54Q8NEL0 328 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 PTPMT1Q8WUK0 201 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 MED18Q9BUE0 208 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 CPNE5Q9HCH3 593 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 DNAJB11Q9UBS4 358 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 PLEKHA6Q9Y2H5 1048 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 TANC1Q9C0D5 1861 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 CEP250Q9BV73 2442 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 POLR2IP36954 125 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 SQSTM1Q13501 440 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 C22orf42Q6IC83 251 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 KCTD20Q7Z5Y7 419 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 ANKRD13BQ86YJ7 626 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 OR4F15Q8NGB8 312 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 TFAP2CQ92754 450 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 MNTQ99583 582 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 SCN3AQ9NY46 2000 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 IGHV3-15A0A0B4J1V0 119 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 RAD51DO75771 328 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 GLP1RP43220 463 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 C21orf58P58505 322 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 SLC37A3Q8NCC5 494 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 SLC22A11Q9NSA0 550 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 DUSP13Q9UII6 198 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 FUOMA2VDF0 154 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 NPIPB8E9PQR5 432 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 SLC2A2P11168 524 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 PGAM2P15259 253 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 CFL1P23528 166 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 FOXL2P58012 376 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 INSM1Q01101 510 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 MFAP5Q13361 173 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 HAVCR1Q96D42 359 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 C4orf36Q96KX1 117 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 SIRT3Q9NTG7 399 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 CNOT2Q9NZN8 540 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 WDR81Q562E7 1941 aa12.82□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF35P13682 527 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 NPR2P20594 1047 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 ERP29P30040 261 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 SLC37A1P57057 533 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 RPL18Q07020 188 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF511Q8NB15 262 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 GJC3Q8NFK1 279 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 PCDHB10Q9UN67 800 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 OR14I1A6ND48 311 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 PSKH1P11801 424 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 DUSP2Q05923 314 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 HNRNPA0Q13151 305 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 MYBPHQ13203 477 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 NXNL2Q5VZ03 156 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 LINC00346Q8IVM7 164 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 ARIH2OSQ8N7S6 290 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 POGLUT1Q8NBL1 392 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 PPP1R35Q8TAP8 253 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 VSTM2LQ96N03 204 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 NIPAL2Q9H841 368 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 METTL15A6NJ78 407 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 SHISA8B8ZZ34 492 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 CSN2P05814 226 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 QDPRP09417 244 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 ABCA11PQ4W5N1 156 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 B3GLCTQ6Y288 498 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms