RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 WIF1Q9Y5W5 379 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 U3KQ87 197 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 ANKUB1A6NFN9 424 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TUBAL3A6NHL2 446 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF99A8MXY4 864 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-201ENST00000442201 RGS5O15539 181 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 AKR7A2O43488 359 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 HCN1O60741 890 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 WBP4O75554 376 aaKnown RBP7.33□□□□□ -1.24
CCDC39-201ENST00000442201 DXOO77932 396 aaKnown RBP7.33□□□□□ -1.24
CCDC39-201ENST00000442201 RCBTB2O95199 551 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 LIPCP11150 499 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 RPS2P15880 293 aaKnown RBP7.33□□□□□ -1.24
CCDC39-201ENST00000442201 CXCR1P25024 350 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TGIF1Q15583 401 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF404Q494X3 552 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TEX30Q5JUR7 227 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 CLEC12AQ5QGZ9 265 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 RPL13AP3Q6NVV1 102 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 H3F3CQ6NXT2 135 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 JMJD6Q6NYC1 403 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-201ENST00000442201 OAFQ86UD1 273 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 SIRT6Q8N6T7 355 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 OR52L1Q8NGH7 329 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 OR8D4Q8NGM9 314 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 OR8J1Q8NGP2 316 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TVP23BQ9NYZ1 205 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 CHCHD2Q9Y6H1 151 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-201ENST00000442201 M0R129 80 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 XPNPEP2O43895 674 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 HK1P19367 917 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 GTF2E2P29084 291 aaKnown RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 TAB1Q15750 504 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 ACER2Q5QJU3 275 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 DCAF10Q5QP82 559 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 GPR139Q6DWJ6 353 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 ACSM5Q6NUN0 579 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 GRINAQ7Z429 371 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 TIGD4Q8IY51 512 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 OR13C2Q8NGS9 318 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 MCFD2Q8NI22 146 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 BRIX1Q8TDN6 353 aaKnown RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 APH1BQ8WW43 257 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 ST8SIA1Q92185 356 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 RBPMSQ93062 196 aaKnown RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF524Q96C55 264 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 THOC3Q96J01 351 aaKnown RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 SGCZQ96LD1 299 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 SAMD8Q96LT4 415 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 FER1L6-AS2Q96M78 137 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 SLC38A2Q96QD8 506 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 IL4I1Q96RQ9 567 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF251Q9BRH9 671 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 OR52D1Q9H346 318 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 MED11Q9P086 117 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 IGKV1D-42A0A075B6H8 117 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 PTGES3LE9PB15 166 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 GFRA3O60609 400 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 FAM20BO75063 409 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 IGF2P01344 180 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 GABRB1P18505 474 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 FUT1P19526 365 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 PTGDSP41222 190 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 POLR2HP52434 150 aaKnown RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 SNAPC1Q16533 368 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 SMN1Q16637 294 aaKnown RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 PRAMEF20Q5VT98 475 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 SLC22A10Q63ZE4 541 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 B3GNTL1Q67FW5 361 aaPredicted RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 SLC30A6Q6NXT4 461 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 POMZP3Q6PJE2 187 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 LSRQ86X29 649 aaPredicted RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 C9orf62Q8N4C0 152 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 OR2T33Q8NG76 320 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 OR51A7Q8NH64 312 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 FAR1Q8WVX9 515 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 MRPL48Q96GC5 212 aaKnown RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 POLDIP3Q9BY77 421 aaKnown RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF275Q9NSD4 429 aaPredicted RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 CLN6Q9NWW5 311 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 WARS2Q9UGM6 360 aaKnown RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 SIGLEC7Q9Y286 467 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 KCNMB2Q9Y691 235 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 CEP250Q9BV73 2442 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 IGLV3-32A0A0A0MS00 114 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 DLL1O00548 723 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 SLC25A12O75746 678 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 IGHV2-70P01814 119 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 P2RY4P51582 365 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 SNRPGP62308 76 aaKnown RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 SMARCD3Q6STE5 483 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 NRARPQ7Z6K4 114 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 RDH10Q8IZV5 341 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 KLHL36Q8N4N3 616 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 C10orf53Q8N6V4 93 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 TCEANCQ8N8B7 351 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 PAQR8Q8TEZ7 354 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 IPCEF1Q8WWN9 437 aaPredicted RBP7.32□□□□□ -1.24
CCDC39-201ENST00000442201 PSMF1Q92530 271 aa7.32□□□□□ -1.24
CCDC39-201ENST00000442201 Q96MT0 163 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms