RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 KLHL14Q9P2G3 628 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 ZNF346Q9UL40 294 aaKnown RBP6.76□□□□□ -1.33
CD44-211ENST00000442151 HEATR1Q9H583 2144 aaKnown RBP6.76□□□□□ -1.33
CD44-211ENST00000442151 VPS13CQ709C8 3753 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 NIPBLQ6KC79 2804 aaeCLIP6.76□□□□□ -1.33
CD44-211ENST00000442151 USF3Q68DE3 2245 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 A0A096LPE4 126 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 A0A1W2PPZ6 126 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 GMNCA6NCL1 334 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 hCG_2039718K7EN88 272 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 NDUFS7O75251 213 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 RAB36O95755 333 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 CD79AP11912 226 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 AHCYP23526 432 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 CSNK1A1P48729 337 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 TEKQ02763 1124 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 PUDPQ08623 228 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 ZP4Q12836 540 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 CAMK2DQ13557 499 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 MAPRE2Q15555 327 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 GSG1Q2KHT4 349 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 GTDC1Q4AE62 458 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 GKAP1Q5VSY0 366 aaPredicted RBP6.76□□□□□ -1.33
CD44-211ENST00000442151 TMEM53Q6P2H8 277 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 VHLLQ6RSH7 139 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 B3GLCTQ6Y288 498 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 SPATA21Q7Z572 469 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 ZNF525Q8N782 197 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 MAPK1IP1LQ8NDC0 245 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 OR9I1Q8NGQ6 314 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 OR5J2Q8NH18 312 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 UBASH3BQ8TF42 649 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 MAL2Q969L2 176 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 SLC41A3Q96GZ6 507 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 MAGEB18Q96M61 343 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 ALKBH3Q96Q83 286 aaPredicted RBP6.76□□□□□ -1.33
CD44-211ENST00000442151 OR2M2Q96R28 347 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 MCHR1Q99705 422 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 PTDSS2Q9BVG9 487 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 ULBP2Q9BZM5 246 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 CRLF2Q9HC73 371 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 SLC6A13Q9NSD5 602 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 BAG5Q9UL15 447 aa6.76□□□□□ -1.33
CD44-211ENST00000442151 CHD3Q12873 2000 aaKnown RBP6.75□□□□□ -1.33
CD44-211ENST00000442151 LOC100289279A0A1B0GTE1 492 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 KIAA1324LA8MWY0 1029 aaPredicted RBP6.75□□□□□ -1.33
CD44-211ENST00000442151 CENPBD1B2RD01 187 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 MS4A18H0YCH9 400 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 M0R3G1 203 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 CHP2O43745 196 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 MFN2O95140 757 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 MT-ND5P03915 603 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 CECR9P0C854 216 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 ADORA3P0DMS8 318 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 PTNP21246 168 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 GLRXP35754 106 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 GUCA1AP43080 201 aaPredicted RBP6.75□□□□□ -1.33
CD44-211ENST00000442151 ZNF84P51523 738 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 PLP2Q04941 152 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 EGR4Q05215 589 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 SPOCK1Q08629 439 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 NFYCQ13952 458 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 GGTLC2Q14390 218 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 MST1LQ2TV78 715 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 MS4A18Q3C1V0 323 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 FAM209AQ5JX71 171 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 NKAPLQ5M9Q1 402 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 ERICH5Q6P6B1 374 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 ZNF813Q6ZN06 617 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 ZNF627Q7L945 461 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 MAVSQ7Z434 540 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 FUNDC1Q8IVP5 155 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 C1orf174Q8IYL3 243 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 KDM8Q8N371 416 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 DPP10Q8N608 796 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 OR6X1Q8NH79 312 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 DOK1Q99704 481 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 VIPAS39Q9H9C1 493 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 SLCO1B3Q9NPD5 702 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 NANSQ9NR45 359 aa6.75□□□□□ -1.33
CD44-211ENST00000442151 FLNAP21333 2647 aaKnown RBP6.75□□□□□ -1.33
CD44-211ENST00000442151 ROS1P08922 2347 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 A0A0B4J2E0 115 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 A0A1B0GX12 115 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 TRAPPC13A5PLN9 417 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 M0QX08 132 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 PLPP3O14495 311 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 SYNGR3O43761 229 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 STAMBPO95630 424 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 BCL10O95999 233 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 C1QCP02747 245 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 BGLAPP02818 100 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 OR8G3PP0DMU2 310 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 IGHV4-31P0DP07 118 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 TROVE2P10155 538 aaKnown RBP eCLIP6.74□□□□□ -1.33
CD44-211ENST00000442151 DAOP14920 347 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 ANPEPP15144 967 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 ZNF23P17027 643 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 SRD5A1P18405 259 aa6.74□□□□□ -1.33
CD44-211ENST00000442151 CD247P20963 164 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms