RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CSTAP01040 98 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 IGHG3P01860 377 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 UBTFL6P0CB48 400 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 CCL3P10147 92 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 UBL4AP11441 157 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 FCGR1AP12314 374 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 ITGA2P17301 1181 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 RHCEP18577 417 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 PTNP21246 168 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 PRKACGP22612 351 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 CEACAM8P31997 349 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 OPRM1P35372 400 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 TIMP3P35625 211 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 KRT20P35900 424 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 CASP3P42574 277 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SSR4P51571 173 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 AQP4P55087 323 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 CDH12P55289 794 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 NRG3P56975 720 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 RGS8P57771 180 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 PPIAP62937 165 aaKnown RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 PSPHP78330 225 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 PLGLB1Q02325 96 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 FOXO1Q12778 655 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 EFR3AQ14156 821 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SF3B4Q15427 424 aaKnown RBP eCLIP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SEC23BQ15437 767 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 OR1Q1Q15612 314 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 TOMM34Q15785 309 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 EXOC3L2Q2M3D2 409 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 TMEM249Q2WGJ8 235 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 NRN1LQ496H8 165 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 EIPR1Q53HC9 387 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 ENTPD8Q5MY95 495 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 PRAMEF20Q5VT98 475 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 OR5M10Q6IEU7 315 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF770Q6IQ21 691 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 OPN5Q6U736 354 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 TRILQ7L0X0 811 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 NUP54Q7Z3B4 507 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 MDGA2Q7Z553 956 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 NKAIN4Q8IVV8 208 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 CMIPQ8IY22 773 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 OFCC1Q8IZS5 231 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 TAGAPQ8N103 731 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 CBR4Q8N4T8 237 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 OR9Q2Q8NGE9 314 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 OR52J3Q8NH60 311 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 OR5K1Q8NHB7 308 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 PAQR8Q8TEZ7 354 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 OIT3Q8WWZ8 545 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 IGFBPL1Q8WX77 278 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 ASB15Q8WXK1 588 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SLC35B4Q969S0 331 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SLC41A3Q96GZ6 507 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SH3YL1Q96HL8 342 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF347Q96SE7 839 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 EPYCQ99645 322 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 CIB1Q99828 191 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 PRSS27Q9BQR3 290 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 TBL1XR1Q9BZK7 514 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 LAT2Q9GZY6 243 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 HOXD1Q9GZZ0 328 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 NMNAT1Q9HAN9 279 aaPredicted RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SMURF2Q9HAU4 748 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 MSL2Q9HCI7 577 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 EXOSC3Q9NQT5 275 aaKnown RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 DEPPQ9NTK1 212 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 GALNT8Q9NY28 637 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 TESQ9UGI8 421 aaKnown RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 ICAM5Q9UMF0 924 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SLC35A3Q9Y2D2 325 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SLC9A8Q9Y2E8 581 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 SAMHD1Q9Y3Z3 626 aaKnown RBP4.24□□□□□ -1.73
PTPN4-206ENST00000441089 U3KQV3 271 aa4.24□□□□□ -1.73
PTPN4-206ENST00000441089 CMYA5Q8N3K9 4069 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 A0A087WUU8 490 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 IGLV3-32A0A0A0MS00 114 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 A0A0A6YYJ9 748 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 A0A0B4J2E0 115 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 A0A1B0GWA3 101 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 A0A1B0GX12 115 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 A0A1W2PRQ8 180 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 TRAPPC13A5PLN9 417 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 PINLYPA6NC86 204 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 LRRC3CA6NJW4 275 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 GNGT2O14610 69 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 ADAMDEC1O15204 470 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 ZNF264O43296 627 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 GMFGO60234 142 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 PIP5K1CO60331 668 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 EIF4E2O60573 245 aaKnown RBP4.23□□□□□ -1.73
PTPN4-206ENST00000441089 HCN1O60741 890 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 FMO6PO60774 539 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 MITFO75030 526 aaPredicted RBP4.23□□□□□ -1.73
PTPN4-206ENST00000441089 OR5F1O95221 314 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 GADD45GO95257 159 aa4.23□□□□□ -1.73
PTPN4-206ENST00000441089 H1F0P07305 194 aaKnown RBP4.23□□□□□ -1.73
PTPN4-206ENST00000441089 HPGDP15428 266 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms