RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 SIP14410 1827 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 G3V3Y1 287 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 GPRIN2O60269 458 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 NPY4RP50391 375 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 TPMTP51580 245 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 TIAL1Q01085 375 aaKnown RBP eCLIP18.89■□□□□ 0.62
FMR1-208ENST00000440235 TANGO2Q6ICL3 276 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 ADAM5Q6NVV9 412 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 SLC16A9Q7RTY1 509 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 HSD17B11Q8NBQ5 300 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 MR1Q95460 341 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 BORCS8Q96FH0 119 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 TRIOBPQ9H2D6 2365 aa18.89■□□□□ 0.62
FMR1-208ENST00000440235 POM121BA6NF01 834 aa18.89■□□□□ 0.61
FMR1-208ENST00000440235 TMEM235A6NFC5 223 aa18.89■□□□□ 0.61
FMR1-208ENST00000440235 MVDP53602 400 aa18.89■□□□□ 0.61
FMR1-208ENST00000440235 SRYQ05066 204 aa18.89■□□□□ 0.61
FMR1-208ENST00000440235 EMC6Q9BV81 110 aa18.89■□□□□ 0.61
FMR1-208ENST00000440235 C17orf113A0A1B0GUU1 675 aa18.89■□□□□ 0.61
FMR1-208ENST00000440235 PLEKHN1Q494U1 663 aaPredicted RBP18.89■□□□□ 0.61
FMR1-208ENST00000440235 CD276Q5ZPR3 534 aa18.89■□□□□ 0.61
FMR1-208ENST00000440235 NLRC3Q7RTR2 1065 aa18.89■□□□□ 0.61
FMR1-208ENST00000440235 GKN2Q86XP6 184 aa18.89■□□□□ 0.61
FMR1-208ENST00000440235 SMCO3A2RU48 225 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 CTNSO60931 367 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 KLK3P07288 261 aaPredicted RBP18.88■□□□□ 0.61
FMR1-208ENST00000440235 HNRNPA1P09651 372 aaKnown RBP eCLIP18.88■□□□□ 0.61
FMR1-208ENST00000440235 CD79BP40259 229 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 MS4A6EQ96DS6 147 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 ZDHHC12Q96GR4 267 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 EMC7Q9NPA0 242 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 WDPCPO95876 746 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 LALBAP00709 142 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 CAMK2DQ13557 499 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 FBXL6Q8N531 539 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 SIRT6Q8N6T7 355 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 GPR32P1Q8NGA4 272 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 FNDC9Q8TBE3 224 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 TMED6Q8WW62 240 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 FAM3DQ96BQ1 224 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 TBC1D20Q96BZ9 403 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 URGCP-MRPS24S4R325 110 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 HSPB6O14558 160 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 PMP2P02689 132 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 CALCBP10092 127 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 IDH3GP51553 393 aaPredicted RBP18.88■□□□□ 0.61
FMR1-208ENST00000440235 CORO6Q6QEF8 472 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.88■□□□□ 0.61
FMR1-208ENST00000440235 CCDC86Q9H6F5 360 aaKnown RBP18.88■□□□□ 0.61
FMR1-208ENST00000440235 ICKQ9UPZ9 632 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 EP300Q09472 2414 aaPredicted RBP18.88■□□□□ 0.61
FMR1-208ENST00000440235 C9J4A7 227 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 KRBOX1C9JBD0 128 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 NXPH3O95157 252 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 RPA2P15927 270 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 ALDH3B1P43353 468 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 S100A12P80511 92 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 REEP5Q00765 189 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 TPBGQ13641 420 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 ELOCQ15369 112 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 FAM189A2Q15884 450 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 ASTLQ6HA08 431 aaPredicted RBP18.88■□□□□ 0.61
FMR1-208ENST00000440235 KIAA0907Q7Z7F0 614 aaPredicted RBP18.88■□□□□ 0.61
FMR1-208ENST00000440235 SLC41A2Q96JW4 573 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 BANF2Q9H503 90 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 ZNF160Q9HCG1 818 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 NEU3Q9UQ49 428 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 MGAMO43451 1857 aa18.88■□□□□ 0.61
FMR1-208ENST00000440235 hCG_1807616A0A1W2PRN6 198 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 TMUB2Q71RG4 321 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 PXT1Q8NFP0 134 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 ATF6BQ99941 703 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 ARHGAP9Q9BRR9 750 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 MCCC2Q9HCC0 563 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 MDC1Q14676 2089 aaKnown RBP18.87■□□□□ 0.61
FMR1-208ENST00000440235 HTR2CP28335 458 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 KIR2DS3Q14952 304 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 PEA15Q15121 130 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 BATFQ16520 125 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 SGPP2Q8IWX5 399 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 PRRT1Q99946 306 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 ABLIM3O94929 683 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 ZDHHC11BP0C7U3 371 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 EIF2S3P41091 472 aaKnown RBP18.87■□□□□ 0.61
FMR1-208ENST00000440235 CRYBB2P43320 205 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 NR0B2Q15466 257 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 H3F3CQ6NXT2 135 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 MED25Q71SY5 747 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 SVBPQ8N300 66 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 ANKRD53Q8N9V6 530 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 IL1F10Q8WWZ1 152 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 FGGYQ96C11 551 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 MED17Q9NVC6 651 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 TBC1D29Q9UFV1 150 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 A0A0G2JMZ2 1700 aa18.87■□□□□ 0.61
FMR1-208ENST00000440235 BRCA1P38398 1863 aaKnown RBP18.87■□□□□ 0.61
FMR1-208ENST00000440235 ACHEP22303 614 aa18.86■□□□□ 0.61
FMR1-208ENST00000440235 AKR1C3P42330 323 aa18.86■□□□□ 0.61
FMR1-208ENST00000440235 TRA2BP62995 288 aaKnown RBP18.86■□□□□ 0.61
FMR1-208ENST00000440235 MRPS10P82664 201 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms