RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 SDR9C7Q8NEX9 313 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 OR1N1Q8NGS0 311 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 CCDC74BQ96LY2 380 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 KLHL15Q96M94 604 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 LINC00052Q96N35 136 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 GSX2Q9BZM3 304 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 WWTR1Q9GZV5 400 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 FN3KQ9H479 309 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 FBXL4Q9UKA2 621 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 PPIEQ9UNP9 301 aaKnown RBP12.88□□□□□ -0.35
LIMD1-202ENST00000440097 ADAM18Q9Y3Q7 739 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 PTPRZ1P23471 2315 aaPredicted RBP12.88□□□□□ -0.35
LIMD1-202ENST00000440097 DAPL1A0PJW8 107 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 TOX3O15405 576 aaPredicted RBP12.88□□□□□ -0.35
LIMD1-202ENST00000440097 PTP4A3O75365 173 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 NDUFB2O95178 105 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 ACSM4P0C7M7 580 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 RBMS1P29558 406 aaKnown RBP12.88□□□□□ -0.35
LIMD1-202ENST00000440097 CCR6P51684 374 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 GBX2P52951 348 aaPredicted RBP12.88□□□□□ -0.35
LIMD1-202ENST00000440097 BAMBIQ13145 260 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 SLC36A2Q495M3 483 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 MARCH3Q86UD3 253 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 C1orf210Q8IVY1 113 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 ACBD7Q8N6N7 88 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 OR51L1Q8NGJ5 315 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 METTL21AQ8WXB1 218 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 MESP1Q9BRJ9 268 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 ZC4H2Q9NQZ6 224 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 KLHL1Q9NR64 748 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 ASB6Q9NWX5 421 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 IER3IP1Q9Y5U9 82 aa12.88□□□□□ -0.35
LIMD1-202ENST00000440097 SLC22A31A6NKX4 558 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 C17orf51A8MQB3 221 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 IDSB3KWA1 339 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 SULT1A3P0DMM9 295 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 SULT1A4P0DMN0 295 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 PRKACAP17612 351 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 GRK6P43250 576 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 DCAF7P61962 342 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 SKP2Q13309 424 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 HBMQ6B0K9 141 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 ARHGAP11AQ6P4F7 1023 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 C7orf57Q8NEG2 295 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 OR4D9Q8NGE8 314 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 SMAP2Q8WU79 429 aaPredicted RBP12.87□□□□□ -0.35
LIMD1-202ENST00000440097 NAT6Q93015 286 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 PTP4A1Q93096 173 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 BEX1Q9HBH7 125 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 SLC22A11Q9NSA0 550 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 ADAMTS9Q9P2N4 1935 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 A0A1B0GVI7 797 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 MCIDASD6RGH6 385 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 M0R233 179 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 TOR1AO14656 332 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 SSNA1O43805 119 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 PNLIPP16233 465 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 TRIM61Q5EBN2 209 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 MAMSTRQ6ZN01 415 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 C16orf47Q6ZP98 133 aaPredicted RBP12.87□□□□□ -0.35
LIMD1-202ENST00000440097 IFI44Q8TCB0 444 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 GIMAP1Q8WWP7 306 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 ST8SIA4Q92187 359 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 TEAD3Q99594 435 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 ZNF649Q9BS31 505 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 CACNG6Q9BXT2 260 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 RASD1Q9Y272 281 aa12.87□□□□□ -0.35
LIMD1-202ENST00000440097 ZFHX2Q9C0A1 2572 aaPredicted RBP12.87□□□□□ -0.35
LIMD1-202ENST00000440097 LY6G6EA0A0G2JKS1 128 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 H3BUI4 141 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 RGS9O75916 674 aaPredicted RBP12.86□□□□□ -0.35
LIMD1-202ENST00000440097 CD3GP09693 182 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 HIST1H1CP16403 213 aaKnown RBP12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ABCD3P28288 659 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ZMYND11Q15326 602 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 GSG1Q2KHT4 349 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 LINC00114Q6XXX2 140 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 KANSL1Q7Z3B3 1105 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 RABEPKQ7Z6M1 372 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 FTMTQ8N4E7 242 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 OR2T35Q8NGX2 323 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 WBP1Q96G27 269 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 TTTY10Q9BZA0 68 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ISG20L2Q9H9L3 353 aaKnown RBP12.86□□□□□ -0.35
LIMD1-202ENST00000440097 APMAPQ9HDC9 416 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 SCP2D1Q9UJQ7 156 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 BAIAP2Q9UQB8 552 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 U3KQA8 63 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 MPDZO75970 2070 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 hCG_1807616A0A1W2PRN6 198 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 RNF13O43567 381 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 PNMTP11086 282 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ZP3P21754 424 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 SHC1P29353 583 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 THBS2P35442 1172 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 MTNR1BP49286 362 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 OR10A3P58181 314 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ZP1P60852 638 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 DCDP81605 110 aaKnown RBP12.86□□□□□ -0.35
LIMD1-202ENST00000440097 COX15Q7KZN9 410 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms