RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 OR4K13Q8NH42 304 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 OR6X1Q8NH79 312 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 RHOXF1Q8NHV9 184 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 MBD3L2Q8NHZ7 208 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 FBLIM1Q8WUP2 373 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 HDAC2Q92769 488 aaKnown RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 PTP4A1Q93096 173 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 OR2M2Q96R28 347 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 ANKRD60Q9BZ19 345 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 TP63Q9H3D4 680 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 GP6Q9HCN6 339 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 KLHL9Q9P2J3 617 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 AASSQ9UDR5 926 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 TINAGQ9UJW2 476 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 RNF6Q9Y252 685 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 PCDHGB5Q9Y5G0 923 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 ZNF407Q9C0G0 2248 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 OR6C68A6NDL8 312 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 GPR171O14626 319 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 ARHGEF9O43307 516 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 TLX2O43763 284 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 SS18L1O75177 396 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 TRMUO75648 421 aaKnown RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 C1QL1O75973 258 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 GLI4P10075 376 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 FCGR2AP12318 317 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 ACADSP16219 412 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 MYF6P23409 242 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 NOS3P29474 1203 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 CEACAM8P31997 349 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 KIR2DL2P43627 348 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 SELENOPP49908 381 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 DAP3P51398 398 aaKnown RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 SNRPGP62308 76 aaKnown RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.64□□□□□ -1.35
UBR3-205ENST00000439681 FOXF2Q12947 444 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 ITGADQ13349 1161 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 MRPL49Q13405 166 aaKnown RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 IL18R1Q13478 541 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 KRR1Q13601 381 aaKnown RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 CRMP1Q14194 572 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 HIST3H3Q16695 136 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 CASP12Q6UXS9 341 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 NUFIP2Q7Z417 695 aaKnown RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 P4HA3Q7Z4N8 544 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 BCDIN3DQ7Z5W3 292 aaKnown RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 ZNF843Q8N446 348 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 FAM26EQ8N5C1 309 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 TCEANCQ8N8B7 351 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 FAM81AQ8TBF8 368 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 TRUB1Q8WWH5 349 aaKnown RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 TMEM45BQ96B21 275 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 NMD3Q96D46 503 aaKnown RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 SLC25A44Q96H78 314 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 GMPPAQ96IJ6 420 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 SLC38A2Q96QD8 506 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 IL4I1Q96RQ9 567 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 KCNK17Q96T54 332 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 NMNAT3Q96T66 252 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 TTYH2Q9BSA4 534 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 HCAR1Q9BXC0 346 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 NMNAT2Q9BZQ4 307 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 GLRX2Q9NS18 164 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 UBAP1Q9NZ09 502 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 KLHL21Q9UJP4 597 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 GPR52Q9Y2T5 361 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 KALRNO60229 2985 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 SMG1Q96Q15 3661 aaKnown RBP6.63□□□□□ -1.35
UBR3-205ENST00000439681 SLC22A23A1A5C7 686 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 PRSS37A4D1T9 235 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 A6NIZ1 184 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 FAM183AA6NL82 134 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 B8ZZF3 427 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 H7C1C5 153 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 WBP4O75554 376 aaKnown RBP6.63□□□□□ -1.35
UBR3-205ENST00000439681 PGA4P0DJD7 388 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 PGA3P0DJD8 388 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 AGTR1P30556 359 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 TIMP3P35625 211 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 CDC42P60953 191 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 RAP1BP61224 184 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 LCN6P62502 163 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 RAP1AP62834 184 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 LGALS3BPQ08380 585 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 CD47Q08722 323 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 CAMK2DQ13557 499 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 MAD2L1BPQ15013 274 aaPredicted RBP6.63□□□□□ -1.35
UBR3-205ENST00000439681 IGFBP7Q16270 282 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 PHYHD1Q5SRE7 291 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 SLC25A30Q5SVS4 291 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 AADACL4Q5VUY2 407 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 FAM205BPQ63HN1 556 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 NIPAL3Q6P499 406 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 B3GNT6Q6ZMB0 384 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 AAED1Q7RTV5 226 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 CPOQ8IVL8 374 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 MCEMP1Q8IX19 187 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 C20orf196Q8IYI0 205 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 GCNT2Q8N0V5 402 aa6.63□□□□□ -1.35
UBR3-205ENST00000439681 CYB561A3Q8NBI2 242 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms