RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ZNF724A8MTY0 619 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 RENP00797 406 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 ACVR2AP27037 513 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 ISL1P61371 349 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 TEKQ02763 1124 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 MAD2L1BPQ15013 274 aaPredicted RBP18.42■□□□□ 0.54
CHD3-204ENST00000439235 C1orf185Q5T7R7 199 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 LEG1Q6P5S2 330 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 SLC37A3Q8NCC5 494 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 SDR9C7Q8NEX9 313 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 RHOXF1Q8NHV9 184 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 TMEM45BQ96B21 275 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 TXNDC15Q96J42 360 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 IL4I1Q96RQ9 567 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 TP63Q9H3D4 680 aaPredicted RBP18.42■□□□□ 0.54
CHD3-204ENST00000439235 BCO1Q9HAY6 547 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 RASSF1Q9NS23 344 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 ZNF226Q9NYT6 803 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 ZNF835Q9Y2P0 537 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 MED12Q93074 2177 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 LAMA5O15230 3695 aa18.42■□□□□ 0.54
CHD3-204ENST00000439235 SLC35F4A4IF30 521 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 CENPBD1B2RD01 187 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 PRR23D1E9PI22 279 aaPredicted RBP18.41■□□□□ 0.54
CHD3-204ENST00000439235 ARHGEF9O43307 516 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 TLX2O43763 284 aaPredicted RBP18.41■□□□□ 0.54
CHD3-204ENST00000439235 AHCYL1O43865 530 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 SLC19A2O60779 497 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 SLC2A10O95528 541 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 TGM6O95932 706 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 IGHG1P01857 330 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 PRR23D2P0DMB1 279 aaPredicted RBP18.41■□□□□ 0.54
CHD3-204ENST00000439235 NR2C1P13056 603 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 EFNB1P98172 346 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 CD47Q08722 323 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 CRMP1Q14194 572 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 MEDAGQ5VYS4 303 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 OR2A2Q6IF42 318 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 CXXC5Q7LFL8 322 aaKnown RBP18.41■□□□□ 0.54
CHD3-204ENST00000439235 FBLIM1Q8WUP2 373 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 GMPPAQ96IJ6 420 aaPredicted RBP18.41■□□□□ 0.54
CHD3-204ENST00000439235 Q96MT0 163 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 ZNF385AQ96PM9 386 aaKnown RBP18.41■□□□□ 0.54
CHD3-204ENST00000439235 TM9SF2Q99805 663 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 CLN6Q9NWW5 311 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 ING1Q9UK53 422 aaPredicted RBP18.41■□□□□ 0.54
CHD3-204ENST00000439235 GPR52Q9Y2T5 361 aa18.41■□□□□ 0.54
CHD3-204ENST00000439235 TRMUO75648 421 aaKnown RBP18.4■□□□□ 0.54
CHD3-204ENST00000439235 YES1P07947 543 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 GABRB1P18505 474 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 ITGADQ13349 1161 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 TMEM201Q5SNT2 666 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 SLC25A30Q5SVS4 291 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 ZNF362Q5T0B9 420 aaPredicted RBP18.4■□□□□ 0.54
CHD3-204ENST00000439235 PLXDC2Q6UX71 529 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 RPTNQ6XPR3 784 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 AAED1Q7RTV5 226 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 FAM26EQ8N5C1 309 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 ZIC4Q8N9L1 334 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 NOXO1Q8NFA2 376 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 FNDC8Q8TC99 324 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 UBE2FQ969M7 185 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 ZNF566Q969W8 418 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 SLC25A44Q96H78 314 aaPredicted RBP18.4■□□□□ 0.54
CHD3-204ENST00000439235 LRR1Q96L50 414 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 NMNAT3Q96T66 252 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 ALG12Q9BV10 488 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 EMC6Q9BV81 110 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 HINT3Q9NQE9 182 aaKnown RBP18.4■□□□□ 0.54
CHD3-204ENST00000439235 NOSIPQ9Y314 301 aaKnown RBP18.4■□□□□ 0.54
CHD3-204ENST00000439235 KIAA1549Q9HCM3 1950 aa18.4■□□□□ 0.54
CHD3-204ENST00000439235 ZNF407Q9C0G0 2248 aa18.39■□□□□ 0.54
CHD3-204ENST00000439235 PRSS37A4D1T9 235 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 MBD3L4A6NDZ8 208 aaPredicted RBP18.39■□□□□ 0.53
CHD3-204ENST00000439235 MBD3L3A6NE82 208 aaPredicted RBP18.39■□□□□ 0.53
CHD3-204ENST00000439235 MBD3L5A6NJ08 208 aaPredicted RBP18.39■□□□□ 0.53
CHD3-204ENST00000439235 CDKN2AP42771 156 aaKnown RBP18.39■□□□□ 0.53
CHD3-204ENST00000439235 CLRN1P58418 232 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 OCLNQ16625 522 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 EIF2S3LQ2VIR3 472 aaKnown RBP18.39■□□□□ 0.53
CHD3-204ENST00000439235 NIPAL3Q6P499 406 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 PLBD1Q6P4A8 553 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 GID4Q8IVV7 300 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 CYB561A3Q8NBI2 242 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 NPEPL1Q8NDH3 523 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 MBD3L2Q8NHZ7 208 aaPredicted RBP18.39■□□□□ 0.53
CHD3-204ENST00000439235 CNIH3Q8TBE1 160 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 HDAC2Q92769 488 aaKnown RBP18.39■□□□□ 0.53
CHD3-204ENST00000439235 OTULINQ96BN8 352 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 OR2M2Q96R28 347 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 PARPBPQ9NWS1 579 aa18.39■□□□□ 0.53
CHD3-204ENST00000439235 VSX1Q9NZR4 365 aaPredicted RBP18.39■□□□□ 0.53
CHD3-204ENST00000439235 H2AFY2Q9P0M6 372 aaPredicted RBP18.39■□□□□ 0.53
CHD3-204ENST00000439235 DSPP15924 2871 aaKnown RBP18.39■□□□□ 0.53
CHD3-204ENST00000439235 SNTNA6NMZ2 147 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 H7C1C5 153 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 SS18L1O75177 396 aaPredicted RBP18.38■□□□□ 0.53
CHD3-204ENST00000439235 SLC43A1O75387 559 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 PGA4P0DJD7 388 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 PGA3P0DJD8 388 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms