RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 THUMPD1Q9NXG2 353 aaKnown RBP9.56□□□□□ -0.88
CSTF3-203ENST00000438862 GIN1Q9NXP7 522 aa9.56□□□□□ -0.88
CSTF3-203ENST00000438862 TESQ9UGI8 421 aaKnown RBP9.56□□□□□ -0.88
CSTF3-203ENST00000438862 TRAPPC4Q9Y296 219 aa9.56□□□□□ -0.88
CSTF3-203ENST00000438862 CMAHPQ9Y471 501 aa9.56□□□□□ -0.88
CSTF3-203ENST00000438862 DTNAQ9Y4J8 743 aa9.56□□□□□ -0.88
CSTF3-203ENST00000438862 FLVCR1Q9Y5Y0 555 aa9.56□□□□□ -0.88
CSTF3-203ENST00000438862 RYR3Q15413 4870 aa9.56□□□□□ -0.88
CSTF3-203ENST00000438862 ARPC4-TTLL3A0A0A6YYG9 625 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 OR6C65A6NJZ3 312 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 DUXAA6NLW8 204 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 EVPLLA8MZ36 301 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 M0R233 179 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 AIM2O14862 343 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 RRP9O43818 475 aaKnown RBP9.55□□□□□ -0.88
CSTF3-203ENST00000438862 EIF1BO60739 113 aaKnown RBP9.55□□□□□ -0.88
CSTF3-203ENST00000438862 DNAJA2O60884 412 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 UBOX5O94941 541 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 CPSF4O95639 269 aaKnown RBP9.55□□□□□ -0.88
CSTF3-203ENST00000438862 AGR2O95994 175 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 KNG1P01042 644 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 IGKV3-15P01624 115 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 GPX2P18283 190 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 APOBEC1P41238 236 aaKnown RBP9.55□□□□□ -0.88
CSTF3-203ENST00000438862 CCR4P51679 360 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 SESN3P58005 492 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 MERTKQ12866 999 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 HSPB3Q12988 150 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 RUNDC3AQ59EK9 446 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 C8orf82Q6P1X6 216 aaPredicted RBP9.55□□□□□ -0.88
CSTF3-203ENST00000438862 LEG1Q6P5S2 330 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 C16orf89Q6UX73 402 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 DHDDSQ86SQ9 333 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 ANKRD46Q86W74 232 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 ARHGAP24Q8N264 748 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 TMCO5AQ8N6Q1 288 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 POU5F2Q8N7G0 328 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 OR1K1Q8NGR3 316 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 MIPOL1Q8TD10 442 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 MAGEE2Q8TD90 523 aaPredicted RBP9.55□□□□□ -0.88
CSTF3-203ENST00000438862 TMEM45BQ96B21 275 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 RCN3Q96D15 328 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 NEURL3Q96EH8 262 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 FAM120BQ96EK7 910 aaKnown RBP9.55□□□□□ -0.88
CSTF3-203ENST00000438862 C1orf147Q96MC9 270 aaPredicted RBP9.55□□□□□ -0.88
CSTF3-203ENST00000438862 STACQ99469 402 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 CGREF1Q99674 301 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 NAA11Q9BSU3 229 aaPredicted RBP9.55□□□□□ -0.88
CSTF3-203ENST00000438862 THUMPD3Q9BV44 507 aaKnown RBP9.55□□□□□ -0.88
CSTF3-203ENST00000438862 TPT1P8Q9HAU6 139 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 OPN4Q9UHM6 478 aa9.55□□□□□ -0.88
CSTF3-203ENST00000438862 B2RBV5 119 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 FXYD1O00168 92 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 CLIC1O00299 241 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 KRT33AO76009 404 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 UBL4AP11441 157 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 CBR1P16152 277 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 CDKN2CP42773 168 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 NUDT2P50583 147 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 FADDQ13158 208 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 TP53BP2Q13625 1128 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 DAG1Q14118 895 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 NDUFAF6Q330K2 333 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 SPDYE7PQ495Y7 208 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 DNAL1Q4LDG9 190 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 EXOSC6Q5RKV6 272 aaKnown RBP9.54□□□□□ -0.88
CSTF3-203ENST00000438862 ZNF362Q5T0B9 420 aaPredicted RBP9.54□□□□□ -0.88
CSTF3-203ENST00000438862 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.54□□□□□ -0.88
CSTF3-203ENST00000438862 LCE3BQ5TA77 95 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 AP1ARQ63HQ0 302 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 NANOGP8Q6NSW7 305 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 CCDC121Q6ZUS5 278 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 SZRD1Q7Z422 152 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 C6orf120Q7Z4R8 191 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 C1QL4Q86Z23 238 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 PGAM4Q8N0Y7 254 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 WFDC12Q8WWY7 111 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 BCL2L2Q92843 193 aaPredicted RBP9.54□□□□□ -0.88
CSTF3-203ENST00000438862 YIPF5Q969M3 257 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 C16orf58Q96GQ5 468 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 CITED1Q99966 193 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 SLC35A5Q9BS91 424 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 SPATA9Q9BWV2 254 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 LAT2Q9GZY6 243 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 PIGUQ9H490 435 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 NANOGQ9H9S0 305 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 BEX1Q9HBH7 125 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 ZCCHC3Q9NUD5 404 aaKnown RBP9.54□□□□□ -0.88
CSTF3-203ENST00000438862 ACER3Q9NUN7 267 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 PLEK2Q9NYT0 353 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 TAS2R1Q9NYW7 299 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 SLC25A37Q9NYZ2 338 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 VAPAQ9P0L0 249 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 SLAMF8Q9P0V8 285 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 NUP50Q9UKX7 468 aa9.54□□□□□ -0.88
CSTF3-203ENST00000438862 RNF103-CHMP3A0A140T963 221 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 NPIPB9F8W1W9 429 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 PIN1P1O15428 100 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 DEAF1O75398 565 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-203ENST00000438862 GUSBP08236 651 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms