RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 KCNK16Q96T55 309 aa1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 SPAG8Q99932 426 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 ST6GALNAC5Q9BVH7 336 aa1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 CHID1Q9BWS9 393 aa1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 SCRT1Q9BWW7 348 aa1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 MMADHCQ9H3L0 296 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 IL1RL2Q9HB29 575 aa1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 UXTQ9UBK9 157 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 PCSK1NQ9UHG2 260 aa1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 ERVK-19Q9WJR5 959 aa1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 KCNK6Q9Y257 313 aa1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 ALG6Q9Y672 507 aa1.71□□□□□ -2.14
HMGB1P18-201ENST00000438801 DOCK11Q5JSL3 2073 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 RGSL1A5PLK6 1076 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 CCDC169A6NNP5 214 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 A8MX80 341 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 DEFB108AA8MXU0 73 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 TRIM49D1C9J1S8 452 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 K7EPI3 171 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 AP3B1O00203 1094 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 HIP1O00291 1037 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 CASQ2O14958 399 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 ST8SIA3O43173 380 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 VEGFDO43915 354 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 SURF6O75683 361 aaKnown RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 BCAS2O75934 225 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 SNX4O95219 450 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 OAS1P00973 400 aaKnown RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 CRYBA1P05813 215 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 UQCRHP07919 91 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 CISD3P0C7P0 127 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 UROSP10746 265 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 LAMP1P11279 417 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 FERP16591 822 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 ARF4P18085 180 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 CCNA2P20248 432 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 MX1P20591 662 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 MARCKSP29966 332 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 TRIM23P36406 574 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 OR3A1P47881 315 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 HNMTP50135 292 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 CCR4P51679 360 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 ARFIP1P53367 373 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 POLR2FP61218 127 aaKnown RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 NUCB2P80303 420 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 HMGN5P82970 282 aaKnown RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 CDKL1Q00532 357 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 C17orf67Q0P5P2 114 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 NPRL3Q12980 569 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 BAMBIQ13145 260 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 ASAH1Q13510 395 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 TSTA3Q13630 321 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLC10A1Q14973 349 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 HSP90B2PQ58FF3 399 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 GPRC6AQ5T6X5 926 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 DDI2Q5TDH0 399 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZNF658Q5TYW1 1059 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 PM20D1Q6GTS8 502 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 ETFRF1Q6IPR1 90 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 GBP6Q6ZN66 633 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 STOX1Q6ZVD7 989 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 CYP4V2Q6ZWL3 525 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 TCF24Q7RTU0 167 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 C17orf64Q86WR6 236 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZNF677Q86XU0 584 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 BBS7Q8IWZ6 715 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 FBXW8Q8N3Y1 598 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 C14orf178Q8N769 122 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZNF645Q8N7E2 425 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 UXS1Q8NBZ7 420 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 OR13F1Q8NGS4 319 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 KIR2DL5BQ8NHK3 375 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLC13A3Q8WWT9 602 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 CTNNBL1Q8WYA6 563 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 BCL2L2Q92843 193 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 AP2M1Q96CW1 435 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 C16orf58Q96GQ5 468 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 C16orf74Q96GX8 76 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 FAM111AQ96PZ2 611 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 ERGIC2Q96RQ1 377 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLC30A2Q9BRI3 323 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 TBCDQ9BTW9 1192 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 APOOQ9BUR5 198 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 TSPYL1Q9H0U9 437 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 ABCG8Q9H221 673 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZNF665Q9H7R5 613 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 FANCFQ9NPI8 374 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 TIGARQ9NQ88 270 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 NINJ2Q9NZG7 142 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 COX16Q9P0S2 106 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 RABL2AQ9UBK7 228 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 MAD2L2Q9UI95 211 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 GNPTGQ9UJJ9 305 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 AURKCQ9UQB9 309 aa1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P18-201ENST00000438801 A0A087X0K7 114 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 A0A1W2PRV1 198 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 MAGEB16A2A368 324 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 ANKDD1BA6NHY2 528 aa1.69□□□□□ -2.14
HMGB1P18-201ENST00000438801 UBXN8O00124 270 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms