RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 LINC01561Q8N1V8 128 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 GPR137CQ8N3F9 429 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 PIBF1Q8WXW3 757 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 C4orf36Q96KX1 117 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 KIR2DL4Q99706 377 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 GABRG3Q99928 467 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 DPH7Q9BTV6 452 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 MRPL13Q9BYD1 178 aaKnown RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 LHX5Q9H2C1 402 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 CAB39LQ9H9S4 337 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 PLSCR3Q9NRY6 295 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 ASF1BQ9NVP2 202 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 VNN3Q9NY84 501 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 MRPL39Q9NYK5 338 aaKnown RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 GALPQ9UBC7 116 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 CHRNA9Q9UGM1 479 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 APOBEC3BQ9UH17 382 aaKnown RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 ANAPC7Q9UJX3 599 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 RNF6Q9Y252 685 aa2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZNF256Q9Y2P7 627 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P12-201ENST00000438745 TLN2Q9Y4G6 2542 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 DHRS7CA6NNS2 312 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 E7ENQ6 273 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 H3BMQ9 156 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 WWP2O00308 870 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 OR7A17O14581 309 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 MAPK13O15264 365 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 RAD1O60671 282 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 GPX5O75715 221 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 F10P00742 488 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 IGLV3-19P01714 112 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 PCCBP05166 539 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 HEXBP07686 556 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 OR8U8P0C7N1 319 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 KRT13P13646 458 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 ADORA2BP29275 332 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 HPDP32754 393 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 DIO3P55073 304 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 STX17P56962 302 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 LYZP61626 148 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 EWSR1Q01844 656 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 KLHL30Q0D2K2 578 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 CUL1Q13616 776 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 ATXN7L3Q14CW9 347 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 DNAJC21Q5F1R6 531 aaKnown RBP2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 DCST2Q5T1A1 773 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 CENPPQ6IPU0 288 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 ZNF544Q6NX49 715 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 NCCRP1Q6ZVX7 275 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 TRPM8Q7Z2W7 1104 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 ANKRD37Q7Z713 158 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 TMEM17Q86X19 198 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 CEND1Q8N111 149 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 WFDC11Q8NEX6 87 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 NANPQ8TBE9 248 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 ITLN2Q8WWU7 325 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 STARD8Q92502 1023 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 NRGNQ92686 78 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 NAT6Q93015 286 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 TMEM159Q96B96 161 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 MS4A14Q96JA4 679 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 XPO6Q96QU8 1125 aaKnown RBP2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 OR5B2Q96R09 309 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 CYP2S1Q96SQ9 504 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 NMUR2Q9GZQ4 415 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 SGK2Q9HBY8 427 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 MRPL40Q9NQ50 206 aaKnown RBP2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 AGPAT4Q9NRZ5 378 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 ANAPC11Q9NYG5 84 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 UXTQ9UBK9 157 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 ABCG2Q9UNQ0 655 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 SMC3Q9UQE7 1217 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 KIF3AQ9Y496 699 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 AP1M2Q9Y6Q5 423 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 DOCK5Q9H7D0 1870 aa2.34□□□□□ -2.03
HMGB3P12-201ENST00000438745 CEP192Q8TEP8 1941 aa2.34□□□□□ -2.04
HMGB3P12-201ENST00000438745 PKD1L1Q8TDX9 2849 aa2.34□□□□□ -2.04
HMGB3P12-201ENST00000438745 NUP210Q8TEM1 1887 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 PTPRDP23468 1912 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZFP92A6NM28 416 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 KIF2AO00139 706 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 OR1F1O43749 312 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 NEBLO76041 1014 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 GUCA1CO95843 209 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 IGF1P05019 195 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 IGHV4-34P06331 123 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZNF19P17023 458 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 DESP17661 470 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 SERPINA2P20848 420 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 ATP6V1C1P21283 382 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 CALB2P22676 271 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 CHMLP26374 656 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 RPL29P47914 159 aaKnown RBP2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 STARP49675 285 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 MRPS11P82912 194 aaKnown RBP2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 OTUD4Q01804 1114 aaKnown RBP2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 PJVKQ0ZLH3 352 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 UBE2SQ16763 222 aa2.33□□□□□ -2.04
HMGB3P12-201ENST00000438745 CEP55Q53EZ4 464 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms