RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TRBV11-1A0A0K0K1C0 115 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 ZFP92A6NM28 416 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 H0YJX3 145 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 FOXE1O00358 373 aaPredicted RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 SCAMP2O15127 329 aaKnown RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 KMOO15229 486 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 LATO43561 262 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CALUO43852 315 aaPredicted RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 UPK3AO75631 287 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 SCRG1O75711 98 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 AHSA1O95433 338 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 NSA2O95478 260 aaKnown RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 H6PDO95479 791 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 APOEP02649 317 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 SEMG1P04279 462 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 HSPB1P04792 205 aaKnown RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 SERPIND1P05546 499 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 KRT7P08729 469 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 SNRPAP09012 282 aaKnown RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 H2BFMP0C1H6 154 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 SERPINA2P20848 420 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 LAP3P28838 519 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 ADORA2BP29275 332 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 HMOX2P30519 316 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 UGT1A5P35504 534 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 RPL13AP40429 203 aaKnown RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CRATP43155 626 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CRYBB2P43320 205 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 NAMPTP43490 491 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CASP4P49662 377 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 SERPINB8P50452 374 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 BCAP31P51572 246 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 TPMTP51580 245 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CDH6P55285 790 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 GLO1Q04760 184 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 RIPPLY1Q0D2K3 151 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CDC20Q12834 499 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 ART3Q13508 389 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 DGCR6Q14129 220 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 DPYSL3Q14195 570 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CAPRIN1Q14444 709 aaKnown RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 ELAVL3Q14576 367 aaKnown RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 NDUFA9Q16795 377 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 BEX5Q5H9J7 111 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CDKL4Q5MAI5 379 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 FAM120AOSQ5T036 256 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 BEND3Q5T5X7 828 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 PVRIGQ6DKI7 326 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 OR2A2Q6IF42 318 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 TTC33Q6PID6 262 aaPredicted RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 FRA10AC1Q70Z53 315 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 BHLHA15Q7RTS1 189 aaPredicted RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 APTXQ7Z2E3 356 aaKnown RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 H2BFWTQ7Z2G1 175 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 MOB3BQ86TA1 216 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 LINC00523Q86TU6 105 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 PPP1R27Q86WC6 154 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 GABRG1Q8N1C3 465 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 LIX1Q8N485 282 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 OR7G2Q8NG99 324 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 OR10A7Q8NGE5 316 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 OR1L4Q8NGR5 311 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 NDNFQ8TB73 568 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 ZNF596Q8TC21 504 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 LRRC20Q8TCA0 184 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 GPX8Q8TED1 209 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 ING5Q8WYH8 240 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 PSMG2Q969U7 264 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 C10orf35Q96D05 121 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CYYR1Q96J86 154 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 OR5B2Q96R09 309 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CNPY3Q9BT09 278 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CHID1Q9BWS9 393 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 PARD6GQ9BYG4 376 aaPredicted RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 POTEKPQ9BYX7 375 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 NDEL1Q9GZM8 345 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 OR51V1Q9H2C8 321 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 FBXO44Q9H4M3 255 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 ISG20L2Q9H9L3 353 aaKnown RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 SLC40A1Q9NP59 571 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 NT5MQ9NPB1 228 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 NANSQ9NR45 359 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 SMOXQ9NWM0 555 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 RHBDL2Q9NX52 303 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 PDP1Q9P0J1 537 aaPredicted RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 TMEM9Q9P0T7 183 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 PITPNC1Q9UKF7 332 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CELA1Q9UNI1 258 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 PUS1Q9Y606 427 aaKnown RBP eCLIP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 POLR3AO14802 1390 aaPredicted RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CPDO75976 1380 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 RPAP1Q9BWH6 1393 aaPredicted RBP2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 TRAV25A0A0B4J276 109 aa2.7□□□□□ -1.98
LSM1P1-201ENST00000438629 SMCO2A6NFE2 343 aa2.7□□□□□ -1.98
LSM1P1-201ENST00000438629 K7ENP7 123 aa2.7□□□□□ -1.98
LSM1P1-201ENST00000438629 PGRMC1O00264 195 aaKnown RBP2.7□□□□□ -1.98
LSM1P1-201ENST00000438629 CDX4O14627 284 aaPredicted RBP2.7□□□□□ -1.98
LSM1P1-201ENST00000438629 NBR2O15453 112 aa2.7□□□□□ -1.98
LSM1P1-201ENST00000438629 GATCO43716 136 aaKnown RBP2.7□□□□□ -1.98
LSM1P1-201ENST00000438629 SNAI1O95863 264 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms