RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 DSPP15924 2871 aaKnown RBP20.5■□□□□ 0.87
CPSF4-204ENST00000436336 PRODHO43272 600 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 RENP00797 406 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 SLC16A1P53985 500 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 BIDP55957 195 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 RASGEF1BQ0VAM2 473 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 EEF1A1P5Q5VTE0 462 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 GID4Q8IVV7 300 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 PTP4A1Q93096 173 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 RFKQ969G6 155 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 OTULINQ96BN8 352 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 SNRNP40Q96DI7 357 aaKnown RBP20.5■□□□□ 0.87
CPSF4-204ENST00000436336 ADAD1Q96M93 576 aaKnown RBP20.5■□□□□ 0.87
CPSF4-204ENST00000436336 PRRG4Q9BZD6 226 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 SCN3BQ9NY72 215 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 BLOC1S6Q9UL45 172 aa20.5■□□□□ 0.87
CPSF4-204ENST00000436336 BOD1L1Q8NFC6 3051 aa20.49■□□□□ 0.87
CPSF4-204ENST00000436336 OR6C68A6NDL8 312 aa20.49■□□□□ 0.87
CPSF4-204ENST00000436336 CLCA1A8K7I4 914 aa20.49■□□□□ 0.87
CPSF4-204ENST00000436336 SMNDC1O75940 238 aaKnown RBP eCLIP20.49■□□□□ 0.871e-8■■■■■ 30.2
CPSF4-204ENST00000436336 CRHBPP24387 322 aa20.49■□□□□ 0.87
CPSF4-204ENST00000436336 TDGF1P3P51864 188 aa20.49■□□□□ 0.87
CPSF4-204ENST00000436336 OR6X1Q8NH79 312 aa20.49■□□□□ 0.87
CPSF4-204ENST00000436336 FNDC9Q8TBE3 224 aa20.49■□□□□ 0.87
CPSF4-204ENST00000436336 TPRKBQ9Y3C4 175 aa20.49■□□□□ 0.87
CPSF4-204ENST00000436336 ZNF175Q9Y473 711 aa20.49■□□□□ 0.87
CPSF4-204ENST00000436336 ACACBO00763 2458 aa20.49■□□□□ 0.87
CPSF4-204ENST00000436336 PRSS37A4D1T9 235 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 XPNPEP2O43895 674 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 FAM20BO75063 409 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 LYNP07948 512 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 NUDT6P53370 316 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 CLDN17P56750 224 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 KCTD21Q4G0X4 260 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 ADGRE4PQ86SQ3 457 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 BBS1Q8NFJ9 593 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 ABHD3Q8WU67 409 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 SLX1AQ9BQ83 275 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 EMC6Q9BV81 110 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 HCAR1Q9BXC0 346 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 NMNAT2Q9BZQ4 307 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 MED20Q9H944 212 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 VSX1Q9NZR4 365 aaPredicted RBP20.48■□□□□ 0.87
CPSF4-204ENST00000436336 KLHL9Q9P2J3 617 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.48■□□□□ 0.87
CPSF4-204ENST00000436336 FLVCR1Q9Y5Y0 555 aa20.48■□□□□ 0.87
CPSF4-204ENST00000436336 SLC35F4A4IF30 521 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 MAGEA13PA6NCF6 341 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 PTGS2P35354 604 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 SLC25A1P53007 311 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 CDH11P55287 796 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 NIPAL3Q6P499 406 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 FGD2Q7Z6J4 655 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 WBP1Q96G27 269 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 SLC25A44Q96H78 314 aaPredicted RBP20.47■□□□□ 0.87
CPSF4-204ENST00000436336 CNTNAP3BQ96NU0 1288 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 KCNK17Q96T54 332 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 CNTNAP3Q9BZ76 1288 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 ZNF696Q9H7X3 374 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 AMBNQ9NP70 447 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 RPL36Q9Y3U8 105 aaKnown RBP20.47■□□□□ 0.87
CPSF4-204ENST00000436336 ALPK2Q86TB3 2170 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 ARHGAP21Q5T5U3 1957 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 SVILO95425 2214 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 MAP1BP46821 2468 aaKnown RBP20.47■□□□□ 0.87
CPSF4-204ENST00000436336 IGKV3D-15A0A087WSY6 115 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 ZNF726A6NNF4 738 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 AHRRA9YTQ3 701 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 H7C1C5 153 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 ZNHIT1O43257 154 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 AKAP8O43823 692 aaKnown RBP20.47■□□□□ 0.87
CPSF4-204ENST00000436336 AHCYL1O43865 530 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 TRMUO75648 421 aaKnown RBP20.47■□□□□ 0.87
CPSF4-204ENST00000436336 AQP8O94778 261 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 FCGR2AP12318 317 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 LCN6P62502 163 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 RUNX1T1Q06455 604 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 LY6DQ14210 128 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 RNPS1Q15287 305 aaKnown RBP20.47■□□□□ 0.87
CPSF4-204ENST00000436336 GTF2IRD2BQ6EKJ0 949 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 GTF2IRD2Q86UP8 949 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 ZIC4Q8N9L1 334 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 ZNF385AQ96PM9 386 aaKnown RBP20.47■□□□□ 0.87
CPSF4-204ENST00000436336 RNF122Q9H9V4 155 aa20.47■□□□□ 0.87
CPSF4-204ENST00000436336 RPRD1BQ9NQG5 326 aaKnown RBP20.47■□□□□ 0.87
CPSF4-204ENST00000436336 ING1Q9UK53 422 aaPredicted RBP20.47■□□□□ 0.87
CPSF4-204ENST00000436336 PKD1L2Q7Z442 2459 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 SLC22A20A6NK97 555 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 GPR171O14626 319 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 SLC2A5P22732 501 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 HTR1FP30939 366 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 GABARAPL2P60520 117 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 SF3B4Q15427 424 aaKnown RBP eCLIP20.46■□□□□ 0.873e-7■■■■■ 27.6
CPSF4-204ENST00000436336 PCSK4Q6UW60 755 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 MEPCEQ7L2J0 689 aaKnown RBP20.46■□□□□ 0.87
CPSF4-204ENST00000436336 WDFY1Q8IWB7 410 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 ZNF540Q8NDQ6 660 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 OR5M9Q8NGP3 310 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 OR9Q1Q8NGQ5 310 aa20.46■□□□□ 0.87
CPSF4-204ENST00000436336 ALG12Q9BV10 488 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms