RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 MDP1Q86V88 176 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 LINC01356Q8N9X3 169 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 ADPRHL1Q8NDY3 354 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 OR9I1Q8NGQ6 314 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 NFKBIDQ8NI38 313 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 UBASH3BQ8TF42 649 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 KTI12Q96EK9 354 aaPredicted RBP6.72□□□□□ -1.33
VPS50-203ENST00000436177 SLC47A1Q96FL8 570 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 OR2M2Q96R28 347 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 PTDSS2Q9BVG9 487 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 NOX3Q9HBY0 568 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 TCF7L2Q9NQB0 619 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 KLHL14Q9P2G3 628 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 FBXL3Q9UKT7 428 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 ANGPT4Q9Y264 503 aa6.72□□□□□ -1.33
VPS50-203ENST00000436177 A0A087WUJ7 227 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 LRP5LA4QPB2 252 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 EVPLLA8MZ36 301 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 TCF21O43680 179 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 TRAF3IP2O43734 574 aaPredicted RBP6.71□□□□□ -1.34
VPS50-203ENST00000436177 SYNGR3O43761 229 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 STAMBPO95630 424 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 HLA-HP01893 362 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 B4GALT1P15291 398 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 CBLP22681 906 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 AHCYP23526 432 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 SLC6A2P23975 617 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 GIFP27352 417 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 AQP1P29972 269 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 CALCRP30988 508 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 PTDSS1P48651 473 aaKnown RBP6.71□□□□□ -1.34
VPS50-203ENST00000436177 CSNK1A1P48729 337 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 MAGOHP61326 146 aaKnown RBP6.71□□□□□ -1.34
VPS50-203ENST00000436177 CDK6Q00534 326 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 HGFACQ04756 655 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 PUDPQ08623 228 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 CCNIQ14094 377 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 SCARB2Q14108 478 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 FAM91A1Q658Y4 838 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 DHRS4L2Q6PKH6 230 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 SLC2A7Q6PXP3 512 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 RINLQ6ZS11 566 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 LINGO2Q7L985 606 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 GLCCI1Q86VQ1 547 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 LSRQ86X29 649 aaPredicted RBP6.71□□□□□ -1.34
VPS50-203ENST00000436177 ARMC8Q8IUR7 673 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 CDK20Q8IZL9 346 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 TMEM123Q8N131 208 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 ZNF786Q8N393 782 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 RFLNBQ8N5W9 214 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 LSMEM1Q8N8F7 131 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 SCAIQ8N9R8 606 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 BHLHE22Q8NFJ8 381 aaPredicted RBP6.71□□□□□ -1.34
VPS50-203ENST00000436177 GTF2H4Q92759 462 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 TAAR8Q969N4 342 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 MAELQ96JY0 434 aaKnown RBP6.71□□□□□ -1.34
VPS50-203ENST00000436177 OR52B2Q96RD2 323 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 TPK1Q9H3S4 243 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 MS4A5Q9H3V2 200 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 DENND2DQ9H6A0 471 aaPredicted RBP6.71□□□□□ -1.34
VPS50-203ENST00000436177 SEC61A2Q9H9S3 476 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 B3GAT1Q9P2W7 334 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 REV1Q9UBZ9 1251 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 SEC14L4Q9UDX3 406 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 TMEFF2Q9UIK5 374 aaPredicted RBP6.71□□□□□ -1.34
VPS50-203ENST00000436177 GPR160Q9UJ42 338 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 ZNF346Q9UL40 294 aaKnown RBP6.71□□□□□ -1.34
VPS50-203ENST00000436177 USH1CQ9Y6N9 552 aa6.71□□□□□ -1.34
VPS50-203ENST00000436177 HEATR1Q9H583 2144 aaKnown RBP6.7□□□□□ -1.34
VPS50-203ENST00000436177 LOC102725191A0A1B0GVB3 256 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 ADARB2-AS1A8MUL3 147 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 B4DSR2 109 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 UBL3O95164 117 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 FARS2O95363 451 aaKnown RBP6.7□□□□□ -1.34
VPS50-203ENST00000436177 MT-ND5P03915 603 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 NR4A1P22736 598 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 HTR2AP28223 471 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 GPR6P46095 362 aaPredicted RBP6.7□□□□□ -1.34
VPS50-203ENST00000436177 GIPRP48546 466 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 SLC18A1P54219 525 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 CDH15P55291 814 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 EGR4Q05215 589 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 PIGFQ07326 219 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 CYP51A1Q16850 503 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 NKPD1Q17RQ9 610 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 GLIPR1L2Q4G1C9 344 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 TNFAIP8L3Q5GJ75 292 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 C20orf196Q8IYI0 205 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 TEX29Q8N6K0 151 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 HIPK4Q8NE63 616 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 OR6S1Q8NH40 331 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 LRRC8CQ8TDW0 803 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 SNX33Q8WV41 574 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 DYDC1Q8WWB3 177 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 MRPL24Q96A35 216 aaKnown RBP6.7□□□□□ -1.34
VPS50-203ENST00000436177 SPDL1Q96EA4 605 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 LRR1Q96L50 414 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 DOK1Q99704 481 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 SYT3Q9BQG1 590 aa6.7□□□□□ -1.34
VPS50-203ENST00000436177 EMC6Q9BV81 110 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms