RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 THAP7Q9BT49 309 aaPredicted RBP10.37□□□□□ -0.75
SCN4A-201ENST00000435607 KLK4Q9Y5K2 254 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 TNFRSF10AO00220 468 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 AQP7O14520 342 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 HCRTR1O43613 425 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 FAM162BQ5T6X4 162 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 CCBE1Q6UXH8 406 aaPredicted RBP10.37□□□□□ -0.75
SCN4A-201ENST00000435607 LRRC28Q86X40 367 aaPredicted RBP10.37□□□□□ -0.75
SCN4A-201ENST00000435607 NKAIN3Q8N8D7 197 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 OR2AE1Q8NHA4 323 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 REEP6Q96HR9 211 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM189-UBE2V1I3L0A0 370 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 CYTIPO60759 359 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 TIGITQ495A1 244 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 MAML2Q8IZL2 1156 aaPredicted RBP10.37□□□□□ -0.75
SCN4A-201ENST00000435607 MRPS24Q96EL2 167 aaKnown RBP10.37□□□□□ -0.75
SCN4A-201ENST00000435607 AKR1E2Q96JD6 320 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 INPP5KQ9BT40 448 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 SOX7Q9BT81 388 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 MUTYHQ9UIF7 546 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 SALL4Q9UJQ4 1053 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 SERTM2A0A1B0GWG4 89 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 ARPC1BO15143 372 aaKnown RBP10.37□□□□□ -0.75
SCN4A-201ENST00000435607 PTTG1O95997 202 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 DEFB103AP81534 67 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 NKAIN2Q5VXU1 208 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 LCN8Q6JVE9 175 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 GPRIN1Q7Z2K8 1008 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 FAM58AQ8N1B3 248 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 OR9Q2Q8NGE9 314 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 NFAT5O94916 1531 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 FAM166BA8MTA8 275 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 TNFSF15O95150 251 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 TSPAN12O95859 305 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 F13BP05160 661 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 FCER1GP30273 86 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 RPS16P62249 146 aaKnown RBP10.36□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM211Q6ICI0 200 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 BCO1Q9HAY6 547 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 LOXHD1Q8IVV2 1947 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 S100A4P26447 101 aaKnown RBP10.36□□□□□ -0.75
SCN4A-201ENST00000435607 IMPA1P29218 277 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 PIGFQ07326 219 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 FAM26DQ5JW98 314 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 RANBP10Q6VN20 620 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 RFPL4BQ6ZWI9 263 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM208Q9BTX3 173 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 HDAC8Q9BY41 377 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 MFRPQ9BY79 579 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 MTCH1Q9NZJ7 389 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 VAMP5O95183 116 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 OMGP23515 440 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 MAGEB1P43366 347 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 SRP9P49458 86 aaKnown RBP10.36□□□□□ -0.75
SCN4A-201ENST00000435607 PGGHGQ32M88 737 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 YIF1BQ5BJH7 314 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 KLHDC8BQ8IXV7 354 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 SLC30A7Q8NEW0 376 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF300Q96RE9 604 aaPredicted RBP10.36□□□□□ -0.75
SCN4A-201ENST00000435607 CAMTA1Q9Y6Y1 1673 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 G3V3Y1 287 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 RAB27BO00194 218 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 PHF1O43189 567 aaPredicted RBP10.36□□□□□ -0.75
SCN4A-201ENST00000435607 FOLR1P15328 257 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 TACR1P25103 407 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 SMAD4Q13485 552 aaKnown RBP10.36□□□□□ -0.75
SCN4A-201ENST00000435607 SLC9A3R2Q15599 337 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF546Q86UE3 836 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 NAXDQ8IW45 347 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 CA5BP1Q8WTZ4 195 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 TMIGD2Q96BF3 282 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 DDX31Q9H8H2 851 aaKnown RBP10.36□□□□□ -0.75
SCN4A-201ENST00000435607 MT-ATP6P00846 226 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 FBP1P09467 338 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 HSD17B1P14061 328 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 ADRA1AP35348 466 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 MAT1AQ00266 395 aaKnown RBP10.36□□□□□ -0.75
SCN4A-201ENST00000435607 OR5I1Q13606 314 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 DPF1Q92782 380 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 CHRDL1Q9BU40 450 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 WWTR1Q9GZV5 400 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF395Q9H8N7 513 aaPredicted RBP10.36□□□□□ -0.75
SCN4A-201ENST00000435607 MYADML2A6NDP7 307 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF749O43361 778 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 RFPL3O75679 317 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 PPP1CAP62136 330 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 PMPCAQ10713 525 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 FGFBP1Q14512 234 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF425Q6IV72 752 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM65Q6PI78 240 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 DND1Q8IYX4 353 aaKnown RBP10.36□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM163Q8TC26 289 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 WBP2Q969T9 261 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 EDEM2Q9BV94 578 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 COMMD5Q9GZQ3 224 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 DEFB127Q9H1M4 99 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 TAS2R16Q9NYV7 291 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 ICE1Q9Y2F5 2266 aa10.36□□□□□ -0.75
SCN4A-201ENST00000435607 RNASEK-C17orf49H0YIS7 233 aa10.35□□□□□ -0.75
SCN4A-201ENST00000435607 HSD17B6O14756 317 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms