RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 PRAMEF17Q5VTA0 474 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 PLXDC1Q8IUK5 500 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 IZUMO1Q8IYV9 350 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 KLHL15Q96M94 604 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 CACNG6Q9BXT2 260 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 LIN7BQ9HAP6 207 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 ZNF304Q9HCX3 659 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 ZNF275Q9NSD4 429 aaPredicted RBP16.84■□□□□ 0.29
CLK1-205ENST00000434813 FRRS1LQ9P0K9 344 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 SEMA5BQ9P283 1151 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 LAMP5Q9UJQ1 280 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 CDC14CA4D256 554 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 TRABD2BA6NFA1 517 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 TVP23AA6NH52 213 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 C19orf67A6NJJ6 358 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.84■□□□□ 0.29
CLK1-205ENST00000434813 K7ESF4 209 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 NDUFB5O43674 189 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 NUDT21O43809 227 aaKnown RBP16.84■□□□□ 0.29
CLK1-205ENST00000434813 DUX1O43812 170 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 AKR7A3O95154 331 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 STOMP27105 288 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 GDNFP39905 211 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 MAGEB1P43366 347 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 CSNK1EP49674 416 aaKnown RBP16.84■□□□□ 0.29
CLK1-205ENST00000434813 NR0B1P51843 470 aaKnown RBP16.84■□□□□ 0.29
CLK1-205ENST00000434813 CFHR1Q03591 330 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 TOMM34Q15785 309 aaPredicted RBP16.84■□□□□ 0.29
CLK1-205ENST00000434813 WDR45BQ5MNZ6 344 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 MARCH3Q86UD3 253 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 ZNF433Q8N7K0 673 aaPredicted RBP16.84■□□□□ 0.29
CLK1-205ENST00000434813 OR6N2Q8NGY6 317 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 SLITRK2Q9H156 845 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 SYT4Q9H2B2 425 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 COPS7AQ9UBW8 275 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 TMEM14AQ9Y6G1 99 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 VCANP13611 3396 aa16.84■□□□□ 0.29
CLK1-205ENST00000434813 A0A087WV48 116 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 PHYHO14832 338 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 ARHGEF9O43307 516 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 MT-ATP6P00846 226 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 CALCBP10092 127 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 PRKCAP17252 672 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 PGCP20142 388 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 ALOX5APP20292 161 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 AFF3P51826 1226 aaKnown RBP16.83■□□□□ 0.28
CLK1-205ENST00000434813 NSDHLQ15738 373 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 VWA2Q5GFL6 755 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 CD276Q5ZPR3 534 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 STAC2Q6ZMT1 411 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 LINGO2Q7L985 606 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 PRSS45Q7RTY3 260 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 OR1N1Q8NGS0 311 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 OMA1Q96E52 524 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 SLC41A2Q96JW4 573 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 HYLS1Q96M11 299 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 INTS14Q96SY0 518 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 IER2Q9BTL4 223 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 TBL1XR1Q9BZK7 514 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 TCF7L1Q9HCS4 588 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 TAS2R5Q9NYW4 299 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 AKAP7Q9P0M2 348 aaPredicted RBP16.83■□□□□ 0.28
CLK1-205ENST00000434813 USP34Q70CQ2 3546 aa16.83■□□□□ 0.28
CLK1-205ENST00000434813 C17orf51A8MQB3 221 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 SMLR1H3BR10 107 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 ZNF780AO75290 641 aaPredicted RBP16.82■□□□□ 0.28
CLK1-205ENST00000434813 ZNF254O75437 659 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 ZNF432O94892 652 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 ITPKBP27987 946 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 CSF2RBP32927 897 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 PNLIPRP2P54317 469 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 C6orf183Q5T699 404 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 ARHGAP40Q5TG30 622 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 FAM205BPQ63HN1 556 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 BTN2A1Q7KYR7 527 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 SLC29A4Q7RTT9 530 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 MAMDC2Q7Z304 686 aaPredicted RBP16.82■□□□□ 0.28
CLK1-205ENST00000434813 EID2Q8N6I1 236 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 ZNF441Q8N8Z8 693 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 ELF4Q99607 663 aaPredicted RBP16.82■□□□□ 0.28
CLK1-205ENST00000434813 PTDSS2Q9BVG9 487 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 EMC7Q9NPA0 242 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 IKZF2Q9UKS7 526 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 TP53BP1Q12888 1972 aaPredicted RBP16.82■□□□□ 0.28
CLK1-205ENST00000434813 A0A1B0GX78 115 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 OR6C76A6NM76 312 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 OR4C45A6NMZ5 311 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 BCAT2O15382 392 aaPredicted RBP16.82■□□□□ 0.28
CLK1-205ENST00000434813 GMFGO60234 142 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 SLC25A12O75746 678 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 MT-ND4P03905 459 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 ANKRD34CP0C6C1 535 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 GP1BBP13224 206 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 FOLR1P15328 257 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 ABCD3P28288 659 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 CCR6P51684 374 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 SNTB2Q13425 540 aaKnown RBP16.82■□□□□ 0.28
CLK1-205ENST00000434813 CBFBQ13951 182 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 SGCBQ16585 318 aa16.82■□□□□ 0.28
CLK1-205ENST00000434813 BTBD16Q32M84 506 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms