RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 HES7Q9BYE0 225 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 SAMSN1Q9NSI8 373 aaKnown RBP4.34□□□□□ -1.71
USP54-206ENST00000433394 MMP17Q9ULZ9 603 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 STARD10Q9Y365 291 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 CDH10Q9Y6N8 788 aa4.34□□□□□ -1.71
USP54-206ENST00000433394 DHX57Q6P158 1386 aaKnown RBP4.34□□□□□ -1.71
USP54-206ENST00000433394 LRRK1Q38SD2 2015 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 IQGAP3Q86VI3 1631 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 RNF17Q9BXT8 1623 aaKnown RBP4.33□□□□□ -1.72
USP54-206ENST00000433394 ARHGEF12Q9NZN5 1544 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 RPRD2Q5VT52 1461 aaKnown RBP4.33□□□□□ -1.72
USP54-206ENST00000433394 A0A1W2PPE3 182 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 ERI2A8K979 691 aaKnown RBP4.33□□□□□ -1.72
USP54-206ENST00000433394 C12orf71A8MTZ7 269 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 CRYGBP07316 175 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 UBTFL1P0CB47 393 aaPredicted RBP4.33□□□□□ -1.72
USP54-206ENST00000433394 KITLGP21583 273 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 RRM2P31350 389 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 VHLP40337 213 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 VDAC2P45880 294 aaPredicted RBP4.33□□□□□ -1.72
USP54-206ENST00000433394 PRRX1P54821 245 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 APOC4P55056 127 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 DLX1P56177 255 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 RGS8P57771 180 aaPredicted RBP4.33□□□□□ -1.72
USP54-206ENST00000433394 GPR157Q5UAW9 335 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
USP54-206ENST00000433394 C19orf35Q6ZS72 473 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 OR2L3Q8NG85 312 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 OR9G1Q8NH87 305 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 DCUN1D4Q92564 292 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 SLC38A4Q969I6 547 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 C12orf42Q96LP6 360 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 ZNF578Q96N58 590 aaPredicted RBP4.33□□□□□ -1.72
USP54-206ENST00000433394 OR8B4Q96RC9 309 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 CHP1Q99653 195 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 SIAEQ9HAT2 523 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 NEK6Q9HC98 313 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 PISDQ9UG56 409 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 CAB39Q9Y376 341 aaPredicted RBP4.33□□□□□ -1.72
USP54-206ENST00000433394 MMP24Q9Y5R2 645 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 ABCA7Q8IZY2 2146 aa4.33□□□□□ -1.72
USP54-206ENST00000433394 KIDINS220Q9ULH0 1771 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 ZC3H13Q5T200 1668 aaKnown RBP4.32□□□□□ -1.72
USP54-206ENST00000433394 PPRC1Q5VV67 1664 aaKnown RBP4.32□□□□□ -1.72
USP54-206ENST00000433394 AGLP35573 1532 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 PRDM15P57071 1507 aaPredicted RBP4.32□□□□□ -1.72
USP54-206ENST00000433394 TRAPPC8Q9Y2L5 1435 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 PLEKHG1Q9ULL1 1385 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 IGKV1D-8A0A087WSZ0 117 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 TCP11X1B4DZS4 312 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 KLF8O95600 359 aaPredicted RBP4.32□□□□□ -1.72
USP54-206ENST00000433394 CST1P01037 141 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 ACLYP53396 1101 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 MRPS22P82650 360 aaKnown RBP4.32□□□□□ -1.72
USP54-206ENST00000433394 ENPEPQ07075 957 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 CYTH1Q15438 398 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 C9orf129Q5T035 196 aaKnown RBP4.32□□□□□ -1.72
USP54-206ENST00000433394 BBOF1Q8ND07 529 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 OR4C5Q8NGB2 326 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 FAM151AQ8WW52 585 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 SH3GL1Q99961 368 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 C20orf85Q9H1P6 137 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 TMED5Q9Y3A6 229 aa4.32□□□□□ -1.72
USP54-206ENST00000433394 NEURL4Q96JN8 1562 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 LMTK2Q8IWU2 1503 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 A2MP01023 1474 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 CCL21O00585 134 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 GOSR2O14653 212 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 AIM2O14862 343 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 ACTL6AO96019 429 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 TIMP1P01033 207 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 FTH1P02794 183 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 GIPP09681 153 aaPredicted RBP4.31□□□□□ -1.72
USP54-206ENST00000433394 ZNF853P0CG23 659 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 FBXW4P57775 412 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 PRPS1P60891 318 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 NRF1Q16656 503 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 TRIM40Q6P9F5 258 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 NKAPP1Q8N9T2 125 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 CCDC54Q8NEL0 328 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 OR1N2Q8NGR9 330 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 C7orf33Q8WU49 177 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 ACOT11Q8WXI4 607 aaPredicted RBP4.31□□□□□ -1.72
USP54-206ENST00000433394 SMARCD2Q92925 531 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 KCNA7Q96RP8 456 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 ECSITQ9BQ95 431 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 RIOK2Q9BVS4 552 aaKnown RBP4.31□□□□□ -1.72
USP54-206ENST00000433394 TMEM59Q9BXS4 323 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 YTHDF1Q9BYJ9 559 aaKnown RBP4.31□□□□□ -1.72
USP54-206ENST00000433394 OR51J1Q9H342 316 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 RNF167Q9H6Y7 350 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 ADAP2Q9NPF8 381 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 NUFIP1Q9UHK0 495 aaKnown RBP4.31□□□□□ -1.72
USP54-206ENST00000433394 CSDC2Q9Y534 153 aaKnown RBP4.31□□□□□ -1.72
USP54-206ENST00000433394 SLC25A15Q9Y619 301 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 TET3O43151 1660 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 VWDEQ8N2E2 1590 aa4.31□□□□□ -1.72
USP54-206ENST00000433394 NUP155O75694 1391 aa4.3□□□□□ -1.72
USP54-206ENST00000433394 NSD2O96028 1365 aa4.3□□□□□ -1.72
USP54-206ENST00000433394 RBMY1BA6NDE4 496 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms