RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 CMSS1Q9BQ75 279 aaKnown RBP3.46□□□□□ -1.86
SHPRH-205ENST00000433355 TRBV2A0A0J9YWF9 115 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 H0YGG7 62 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 ONECUT2O95948 504 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 FOSL2P15408 326 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 AK4P27144 223 aaPredicted RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 FEN1P39748 380 aaKnown RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 FOXA1P55317 472 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 HNRNPA0Q13151 305 aaKnown RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 RAB31Q13636 194 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 HYAL4Q2M3T9 481 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 PSMG4Q5JS54 123 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 RHBDD2Q6NTF9 364 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM107Q6UX40 140 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 OR4M2Q8NGB6 313 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 UPRTQ96BW1 309 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 ORAI1Q96D31 301 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 GFM1Q96RP9 751 aaKnown RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 THAP7Q9BT49 309 aaPredicted RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 BOCQ9BWV1 1114 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 SUCNR1Q9BXA5 334 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 SLC25A31Q9H0C2 315 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 S1PR5Q9H228 398 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 CLEC4AQ9UMR7 237 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 PRKAB1Q9Y478 270 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 KRBA1A5PL33 1030 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 CXorf65A6NEN9 183 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 SLC17A2O00624 439 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 MED6O75586 246 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 CRHP06850 196 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 CERS1P27544 350 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 RAB11FIP2Q7L804 512 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 OR52E1Q8NGJ3 308 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 OR2T35Q8NGX2 323 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM106AQ96A25 262 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 ELF4Q99607 663 aaPredicted RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 GLIPR2Q9H4G4 154 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 SDHAF2Q9NX18 166 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 STEAP1Q9UHE8 339 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 SPEF1Q9Y4P9 236 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 A0A0U1RQV5 110 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 A0A1W2PQ09 198 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 ABCD4O14678 606 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 RLN1P04808 185 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 ARSBP15848 533 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 PRDX3P30048 256 aaKnown RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 FOLR3P41439 243 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 GDF5P43026 501 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 ATP1B3P54709 279 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 CLDN20P56880 219 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 MLF2Q15773 248 aaPredicted RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 C1orf140Q5VVS0 124 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 WDSUB1Q8N9V3 476 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 NPEPL1Q8NDH3 523 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 CNIH3Q8TBE1 160 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 UBASH3BQ8TF42 649 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 GGHQ92820 318 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 MOCOSQ96EN8 888 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 SRRQ9GZT4 340 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 SIRT3Q9NTG7 399 aaPredicted RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 RHCGQ9UBD6 479 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 CPED1A4D0V7 1026 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 OR52A4PA6NMU1 304 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 TSC22D2O75157 780 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 PAK4O96013 591 aaPredicted RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 ISG15P05161 165 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 FABP1P07148 127 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 OR12D1P0DN82 309 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 HTR2CP28335 458 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 PRKXP51817 358 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 RPS4XP62701 263 aaKnown RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 UBE2IP63279 158 aaKnown RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF658BQ4V348 819 aaPredicted RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 FAAH2Q6GMR7 532 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 MARCH9Q86YJ5 346 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 LYSMD2Q8IV50 215 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 KIRREL1Q96J84 757 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 NICN1Q9BSH3 213 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 CDADC1Q9BWV3 514 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 AMBRA1Q9C0C7 1298 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 ADAM19Q9H013 955 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 TAS2R5Q9NYW4 299 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF225Q9UK10 706 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 KIAA2026Q5HYC2 2103 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 CYB5BO43169 146 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 KLF4O43474 513 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 KLF8O95600 359 aaPredicted RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 MT-CO2P00403 227 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 DNASE1P24855 282 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 GRK1Q15835 563 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 AADACL4Q5VUY2 407 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 GTPBP8Q8N3Z3 284 aaPredicted RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 OR2A1Q8NGT9 310 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 GNPNAT1Q96EK6 184 aaPredicted RBP3.45□□□□□ -1.86
SHPRH-205ENST00000433355 OR2A5Q96R48 311 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 TBC1D17Q9HA65 648 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 NGBQ9NPG2 151 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 ATP13A2Q9NQ11 1180 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 IL36GQ9NZH8 169 aa3.45□□□□□ -1.86
SHPRH-205ENST00000433355 MEIOCA2RUB1 952 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms