RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 EXO5Q9H790 373 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 GPN1Q9HCN4 374 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-202ENST00000432306 KRCC1Q9NPI7 259 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-202ENST00000432306 EXOSC3Q9NQT5 275 aaKnown RBP7.37□□□□□ -1.23
VTI1A-202ENST00000432306 CTPS2Q9NRF8 586 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 SEMA4GQ9NTN9 838 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 EPHA6Q9UF33 1036 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 NDRG3Q9UGV2 375 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 OPN4Q9UHM6 478 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 ST6GALNAC2Q9UJ37 374 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 GMEB2Q9UKD1 530 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 COPS3Q9UNS2 423 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 CNOT1A5YKK6 2376 aaKnown RBP7.37□□□□□ -1.23
VTI1A-202ENST00000432306 ANAPC1Q9H1A4 1944 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 A0A0A6YYD5 115 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 GSAPA4D1B5 854 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 ZNF98A6NK75 572 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 A8MX80 341 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 SAP18O00422 153 aaKnown RBP7.36□□□□□ -1.23
VTI1A-202ENST00000432306 SDC3O75056 442 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 NDUFB6O95139 128 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 PCDH8O95206 1070 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 OPN1LWP04000 364 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 THY1P04216 161 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 ALDOBP05062 364 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 PROS1P07225 676 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 SBK2P0C263 348 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 ZGLP1P0C6A0 271 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 IRF1P10914 325 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 SRFP11831 508 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 EPCAMP16422 314 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 PREPP48147 710 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 SNU13P55769 128 aaKnown RBP7.36□□□□□ -1.23
VTI1A-202ENST00000432306 MAT1AQ00266 395 aaKnown RBP7.36□□□□□ -1.23
VTI1A-202ENST00000432306 REEP5Q00765 189 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 TMEM115Q12893 351 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-202ENST00000432306 HTR4Q13639 388 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 ZNF528Q3MIS6 628 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 SPDYE7PQ495Y7 208 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 ACSM3Q53FZ2 586 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 KHDC1LQ5JSQ8 128 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 PRAMEF20Q5VT98 475 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 PRAMEF13Q5VWM6 474 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 FAM199XQ6PEV8 388 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-202ENST00000432306 UQCC3Q6UW78 93 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 DPPA4Q7L190 304 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 HSD11B1LQ7Z5J1 315 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 CEACAM19Q7Z692 300 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 MRPL41Q8IXM3 137 aaKnown RBP7.36□□□□□ -1.23
VTI1A-202ENST00000432306 TMIEQ8NEW7 156 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 BEST4Q8NFU0 473 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 OR56A1Q8NGH5 318 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 OR51G2Q8NGK0 314 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 ZNF461Q8TAF7 563 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 GLMPQ8WWB7 406 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 XAGE5Q8WWM1 108 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 CFHR4Q92496 578 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 SCAMP4Q969E2 229 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 SLAMF9Q96A28 289 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 FAM46AQ96IP4 442 aaKnown RBP7.36□□□□□ -1.23
VTI1A-202ENST00000432306 DGAT2Q96PD7 388 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 TPPP3Q9BW30 176 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 DPH1Q9BZG8 443 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 ALX4Q9H161 411 aaPredicted RBP7.36□□□□□ -1.23
VTI1A-202ENST00000432306 ZBP1Q9H171 429 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 CMC2Q9NRP2 79 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 TDP1Q9NUW8 608 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 DNAJB12Q9NXW2 375 aaKnown RBP7.36□□□□□ -1.23
VTI1A-202ENST00000432306 MED11Q9P086 117 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 KLHL9Q9P2J3 617 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 CA14Q9ULX7 337 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 SLC6A5Q9Y345 797 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 MRPS2Q9Y399 296 aaKnown RBP7.36□□□□□ -1.23
VTI1A-202ENST00000432306 SIT1Q9Y3P8 196 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 COL4A3Q01955 1670 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 DOCK6Q96HP0 2047 aa7.36□□□□□ -1.23
VTI1A-202ENST00000432306 DAPL1A0PJW8 107 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ANXA2P2A6NMY6 339 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 FLRT2O43155 660 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ADAM12O43184 909 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 NARSO43776 548 aaKnown RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 TMPRSS11DO60235 418 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 GMDSO60547 372 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 ADAM11O75078 769 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 OR2C1O95371 312 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 MT-ND4P03905 459 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 DCNP07585 359 aaKnown RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 RAB40ALP0C0E4 278 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 TBXA2RP21731 343 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 HNRNPA2B1P22626 353 aaKnown RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 CFPP27918 469 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 MPGP29372 298 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 PDHA2P29803 388 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 MAT2AP31153 395 aaKnown RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 CD70P32970 193 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 VEGFCP49767 419 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 FXYD6P3P58550 94 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 SLC7A9P82251 487 aa7.35□□□□□ -1.23
VTI1A-202ENST00000432306 SRSF4Q08170 494 aaKnown RBP7.35□□□□□ -1.23
VTI1A-202ENST00000432306 HSPB3Q12988 150 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms