RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 IFNGR1P15260 489 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 IDUAP35475 653 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 APOBEC1P41238 236 aaKnown RBP8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CDKN2AP42771 156 aaKnown RBP8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLC16A1P53985 500 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CTBP2P56545 445 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CLDN18P56856 261 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CAMK2DQ13557 499 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CRMP1Q14194 572 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLC10A1Q14973 349 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 PON3Q15166 354 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 ALG10Q5BKT4 473 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 FAM69AQ5T7M9 428 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 C9orf135Q5VTT2 229 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 PLBD1Q6P4A8 553 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 Q6ZS92 163 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZBTB46Q86UZ6 589 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 TMEM178AQ8NBL3 297 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR52E2Q8NGJ4 325 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZNF837Q96EG3 531 aaPredicted RBP8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CCDC90BQ9GZT6 254 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CCNB1IP1Q9NPC3 277 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 SCN3BQ9NY72 215 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 IL20Q9NYY1 176 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 B3GAT1Q9P2W7 334 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 CAMK2AQ9UQM7 478 aa8.51□□□□□ -1.05
HMGCLL1-206ENST00000428842 SMAD9O15198 467 aaKnown RBP8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 ENTPD6O75354 484 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 MPZL1O95297 269 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 MT-ND2P03891 347 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 NR4A1P22736 598 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 BCAP31P51572 246 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 P2RY4P51582 365 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 PSMD7P51665 324 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 SNAPC1Q16533 368 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 RGS21Q2M5E4 152 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 HBMQ6B0K9 141 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 CDK20Q8IZL9 346 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 SVOPQ8N4V2 548 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 RFLNBQ8N5W9 214 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 TEX47Q8TBZ9 253 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 PIGQQ9BRB3 760 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 GABARAPL3Q9BY60 117 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 FAM117AQ9C073 453 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 WDR12Q9GZL7 423 aaKnown RBP8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR51V1Q9H2C8 321 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 HINT3Q9NQE9 182 aaKnown RBP8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR6C68A6NDL8 312 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 PLPP3O14495 311 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 LRRTM2O43300 516 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 ARHGEF9O43307 516 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 PSKH1P11801 424 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 MSX1P28360 303 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 PYCR1P32322 319 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 MAP2K4P45985 399 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 FOXG1P55316 489 aaPredicted RBP8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 FOXK2Q01167 660 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 ACKR1Q16570 336 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 SGCBQ16585 318 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 KLHL12Q53G59 568 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 MESTQ5EB52 335 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 EEF1A1P5Q5VTE0 462 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 TMEM81Q6P7N7 255 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 PAQR6Q6TCH4 344 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 RASSF6Q6ZTQ3 369 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 PRSS48Q7RTY5 328 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 CPOQ8IVL8 374 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 LSM14AQ8ND56 463 aaKnown RBP8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 C9orf43Q8TAL5 461 aaPredicted RBP8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 DYNC2LI1Q8TCX1 351 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 IPCEF1Q8WWN9 437 aaPredicted RBP8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 PTP4A1Q93096 173 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZBTB8AQ96BR9 441 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 DDIT4LQ96D03 193 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 HRASLS5Q96KN8 279 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 LRR1Q96L50 414 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 KLHL15Q96M94 604 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 TBX5Q99593 518 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 TMEM43Q9BTV4 400 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 TAPBPLQ9BX59 468 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 SRA1Q9HD15 236 aaKnown RBP8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 HMG20AQ9NP66 347 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 ACOT13Q9NPJ3 140 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 PCDHGA9Q9Y5G4 932 aaKnown RBP8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 CDH10Q9Y6N8 788 aa8.5□□□□□ -1.05
HMGCLL1-206ENST00000428842 TRGV5A0A0B4J1U4 118 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 PSMD9O00233 223 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 ETV2O00321 342 aaPredicted RBP8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 RGS10O43665 173 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 HPNP05981 417 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 C21orf33P30042 268 aaPredicted RBP8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 UQCRC1P31930 480 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 GGT2P36268 569 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 RBM34P42696 430 aaKnown RBP8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 CARD18P57730 90 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 RPS4XP62701 263 aaKnown RBP8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 CDK5Q00535 292 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 SELENBP1Q13228 472 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 ITGADQ13349 1161 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 MEP1BQ16820 701 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms