RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 EML6Q6ZMW3 1958 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 TPRP12270 2363 aaKnown RBP7.59□□□□□ -1.19
CD44-208ENST00000428726 HMX3A6NHT5 357 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 NUPL2O15504 423 aaKnown RBP7.59□□□□□ -1.19
CD44-208ENST00000428726 ZNF264O43296 627 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 SIGLEC6O43699 453 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 ICMTO60725 284 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 GATBO75879 557 aaKnown RBP7.59□□□□□ -1.19
CD44-208ENST00000428726 NSA2O95478 260 aaKnown RBP7.59□□□□□ -1.19
CD44-208ENST00000428726 CXCL3P19876 107 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 GALP22466 123 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 ABCD3P28288 659 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 CCL7P80098 99 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 MRPL28Q13084 256 aaKnown RBP7.59□□□□□ -1.19
CD44-208ENST00000428726 FCN2Q15485 313 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 FCRLAQ7L513 359 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 BATF2Q8N1L9 274 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 GDPD1Q8N9F7 314 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 ZSCAN1Q8NBB4 408 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 OR7G1Q8NGA0 311 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 OR8S1Q8NH09 359 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 WDR89Q96FK6 387 aaPredicted RBP7.59□□□□□ -1.19
CD44-208ENST00000428726 ZDHHC12Q96GR4 267 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 MAP6Q96JE9 813 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 LMF2Q9BU23 707 aaKnown RBP7.59□□□□□ -1.19
CD44-208ENST00000428726 ABCG5Q9H222 651 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 SLC22A11Q9NSA0 550 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 FBXL3Q9UKT7 428 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 POLHQ9Y253 713 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 SIT1Q9Y3P8 196 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 TLCD2A6NGC4 264 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 LMO7DNF2Z398 122 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 INMT-MINDY4F8WBC2 141 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 J3QRE1 110 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 SLC25A12O75746 678 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 CLPSP04118 112 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 ENPP1P22413 925 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 NUDT1P36639 197 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 HSD11B2P80365 405 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 FGFBP1Q14512 234 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 OR7A5Q15622 319 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 LIPNQ5VXI9 398 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 SFXN4Q6P4A7 337 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 LINGO2Q7L985 606 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 GRAMD2AQ8IUY3 354 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 ARIH2OSQ8N7S6 290 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 PLPP7Q8NBV4 271 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 NPEPL1Q8NDH3 523 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 LGALS14Q8TCE9 139 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 KIAA1143Q96AT1 154 aaPredicted RBP7.59□□□□□ -1.19
CD44-208ENST00000428726 GPR27Q9NS67 375 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 SUSD2Q9UGT4 822 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 BAIAP2Q9UQB8 552 aa7.59□□□□□ -1.19
CD44-208ENST00000428726 ADAMTS9Q9P2N4 1935 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 A0A1W2PQM1 296 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 BLACEA4D250 179 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 SLC22A31A6NKX4 558 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 RGS9O75916 674 aaPredicted RBP7.58□□□□□ -1.2
CD44-208ENST00000428726 HIST1H2ABP04908 130 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 ARSBP15848 533 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 ZNF28P17035 718 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 GIFP27352 417 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 CDAP32320 146 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 DDOSTP39656 456 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 NXPH1P58417 271 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 PPP3R1P63098 170 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 GALEQ14376 348 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 NDUFA5Q16718 116 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.58□□□□□ -1.2
CD44-208ENST00000428726 LRFN4Q6PJG9 635 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 HIST3H2AQ7L7L0 130 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 RTN4RL2Q86UN3 420 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 DNAJA4Q8WW22 397 aaPredicted RBP7.58□□□□□ -1.2
CD44-208ENST00000428726 DVL3Q92997 716 aaPredicted RBP7.58□□□□□ -1.2
CD44-208ENST00000428726 HIST1H2ACQ93077 130 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 FAM46BQ96A09 425 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 SEC61A2Q9H9S3 476 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 INPP5EQ9NRR6 644 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 NPAP1Q9NZP6 1156 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 NCDNQ9UBB6 729 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 IGKV1D-43A0A0B4J1Z2 117 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 DCDC2BA2VCK2 349 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 POM121CA8CG34 1229 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 SRPX2O60687 465 aaPredicted RBP7.58□□□□□ -1.2
CD44-208ENST00000428726 ZNF780AO75290 641 aaPredicted RBP7.58□□□□□ -1.2
CD44-208ENST00000428726 OR6A2O95222 327 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 DDAH2O95865 285 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 UCHL1P09936 223 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 ANKRD34CP0C6C1 535 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 CFL1P23528 166 aaKnown RBP7.58□□□□□ -1.2
CD44-208ENST00000428726 RBM34P42696 430 aaKnown RBP7.58□□□□□ -1.2
CD44-208ENST00000428726 GPR85P60893 370 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 SLC43A2Q8N370 569 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 ARHGEF39Q8N4T4 335 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 METTL21AQ8WXB1 218 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 CREB3L1Q96BA8 519 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 MSANTD3Q96H12 275 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 C5orf34Q96MH7 638 aa7.58□□□□□ -1.2
CD44-208ENST00000428726 CNN2Q99439 309 aaKnown RBP7.58□□□□□ -1.2
CD44-208ENST00000428726 DPCDQ9BVM2 203 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms