RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 BPESC1Q9GZL8 116 aa10.42□□□□□ -0.74
TTC3-208ENST00000428693 TPK1Q9H3S4 243 aa10.42□□□□□ -0.74
TTC3-208ENST00000428693 NOX3Q9HBY0 568 aa10.42□□□□□ -0.74
TTC3-208ENST00000428693 SLC52A3Q9NQ40 469 aa10.42□□□□□ -0.74
TTC3-208ENST00000428693 CRNNQ9UBG3 495 aaPredicted RBP10.42□□□□□ -0.74
TTC3-208ENST00000428693 TRIM33Q9UPN9 1127 aa10.42□□□□□ -0.74
TTC3-208ENST00000428693 SPEF1Q9Y4P9 236 aa10.42□□□□□ -0.74
TTC3-208ENST00000428693 MALRD1Q5VYJ5 2156 aa10.42□□□□□ -0.74
TTC3-208ENST00000428693 TRBV5-3A0A0A0MS03 114 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 IGHV4-61A0A0C4DH41 118 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 A0A0G2JND7 137 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 LRP5LA4QPB2 252 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 PLPP3O14495 311 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 PHF1O43189 567 aaPredicted RBP10.41□□□□□ -0.74
TTC3-208ENST00000428693 RNF13O43567 381 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 TPST2O60704 377 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 PDE5AO76074 875 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 MFN2O95140 757 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 RAB36O95755 333 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 CH25HO95992 272 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 TGFAP01135 160 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 HIST1H2ABP04908 130 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 IFNGR1P15260 489 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 SRD5A1P18405 259 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 PPOXP50336 477 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 GALK2Q01415 458 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 SF3A3Q12874 501 aaKnown RBP eCLIP10.41□□□□□ -0.742e-6■■□□□ 12.3
TTC3-208ENST00000428693 SELPLGQ14242 412 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 EFNB3Q15768 340 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 DUSP7Q16829 419 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 TRMT5Q32P41 509 aaKnown RBP10.41□□□□□ -0.74
TTC3-208ENST00000428693 C3orf36Q3SXR2 165 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 ENTPD8Q5MY95 495 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 TTC33Q6PID6 262 aaPredicted RBP10.41□□□□□ -0.74
TTC3-208ENST00000428693 DLEU7Q6UYE1 221 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 HIST3H2AQ7L7L0 130 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 CCDC36Q8IYA8 594 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 SCAIQ8N9R8 606 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 ZNF540Q8NDQ6 660 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 ADPRHL1Q8NDY3 354 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 NUP37Q8NFH4 326 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 OR5J2Q8NH18 312 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 HIST1H2ACQ93077 130 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 CGREF1Q99674 301 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 MYOZ1Q9NP98 299 aaPredicted RBP10.41□□□□□ -0.74
TTC3-208ENST00000428693 MRPL39Q9NYK5 338 aaKnown RBP10.41□□□□□ -0.74
TTC3-208ENST00000428693 LPAR3Q9UBY5 353 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 SLC7A7Q9UM01 511 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 CMAHPQ9Y471 501 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 STAB1Q9NY15 2570 aa10.41□□□□□ -0.74
TTC3-208ENST00000428693 SVEP1Q4LDE5 3571 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 LOC102725191A0A1B0GVB3 256 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 PATE4P0C8F1 98 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 TCN1P20061 433 aaPredicted RBP10.4□□□□□ -0.74
TTC3-208ENST00000428693 HNF1AP20823 631 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 LSP1P33241 339 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 GIPRP48546 466 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 RAB1AP62820 205 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 MELKQ14680 651 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 ZNF613Q6PF04 617 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 SLC35D2Q76EJ3 337 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 PXKQ7Z7A4 578 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 PTOV1Q86YD1 416 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 RBM45Q8IUH3 476 aaKnown RBP10.4□□□□□ -0.74
TTC3-208ENST00000428693 CDK20Q8IZL9 346 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 FAM169BQ8N8A8 192 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 IL17RDQ8NFM7 739 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 OR6T1Q8NGN1 323 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 OR6S1Q8NH40 331 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 OR10A6Q8NH74 314 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 MSI2Q96DH6 328 aaKnown RBP10.4□□□□□ -0.74
TTC3-208ENST00000428693 SLC41A3Q96GZ6 507 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 MAGEB18Q96M61 343 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 SNX18Q96RF0 628 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 ARHGDIGQ99819 225 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 FOXB1Q99853 325 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 SYT3Q9BQG1 590 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 TMEM43Q9BTV4 400 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 ZNF442Q9H7R0 627 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 RNF121Q9H920 327 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 NANSQ9NR45 359 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 FZR1Q9UM11 496 aa10.4□□□□□ -0.74
TTC3-208ENST00000428693 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.39□□□□□ -0.75
TTC3-208ENST00000428693 HMGB1P1B2RPK0 211 aaPredicted RBP10.39□□□□□ -0.75
TTC3-208ENST00000428693 VWC2LB2RUY7 222 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 LYNX1G3V0Z9 82 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 CHP2O43745 196 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 STAMBPO95630 424 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 MT-ATP6P00846 226 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 VIMP08670 466 aaKnown RBP10.39□□□□□ -0.75
TTC3-208ENST00000428693 LYNX1P0DP58 116 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 ZNF23P17027 643 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 CD247P20963 164 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 NR4A1P22736 598 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 IGFBP5P24593 272 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 APEX1P27695 318 aaKnown RBP10.39□□□□□ -0.75
TTC3-208ENST00000428693 SRSF2Q01130 221 aaKnown RBP10.39□□□□□ -0.75
TTC3-208ENST00000428693 RBBP4Q09028 425 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 RAB39AQ14964 217 aa10.39□□□□□ -0.75
TTC3-208ENST00000428693 MMEL1Q495T6 779 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms