RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ASB16Q96NS5 453 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 STACQ99469 402 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 ZCCHC2Q9C0B9 1178 aaKnown RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 MARCH5Q9NX47 278 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 KCNE5Q9UJ90 142 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 CH25HO95992 272 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 GAPDHP04406 335 aaKnown RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 CRHP06850 196 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 HOXB5P09067 269 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 HOXA5P20719 270 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 CTSOP43234 321 aaPredicted RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 DUSP8Q13202 625 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 COA6Q5JTJ3 125 aaKnown RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 RNF219Q5W0B1 726 aaPredicted RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 BEST3Q8N1M1 668 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 SFXN5Q8TD22 340 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 CCDC107Q8WV48 283 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 OTUB2Q96DC9 234 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 AQP10Q96PS8 301 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 MAP3K3Q99759 626 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 LAT2Q9GZY6 243 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 SUV39H2Q9H5I1 410 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 NOX4Q9NPH5 578 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 CALML5Q9NZT1 146 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 JMJD1CQ15652 2540 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 COL12A1Q99715 3063 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 TRBV2A0A0J9YWF9 115 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 LINC01590Q5TEZ4 76 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 OR9A1PQ8NGU1 263 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 OR5AK2Q8NH90 309 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 HIST1H2BAQ96A08 127 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 CNRIP1Q96F85 164 aaPredicted RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 OR5B2Q96R09 309 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 RNF126Q9BV68 326 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 CHST6Q9GZX3 395 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 SEC61A2Q9H9S3 476 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 KCNK12Q9HB15 430 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 FAM86C1Q9NVL1 165 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 ZNF219Q9P2Y4 722 aaPredicted RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 ZNF281Q9Y2X9 895 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 LRRK2Q5S007 2527 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 HSPB2A8KAH6 182 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 IL2RAP01589 272 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 GUSBP08236 651 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 SGSHP51688 502 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 SNRPEP62304 92 aaKnown RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 HSD11B2P80365 405 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 HSPB2Q16082 182 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 LIPNQ5VXI9 398 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 SLC25A42Q86VD7 318 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 GCDHQ92947 438 aaPredicted RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 GLYATL1Q969I3 302 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 C14orf144Q96I85 54 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 DHCR7Q9UBM7 475 aaKnown RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 TMEM184BQ9Y519 407 aaPredicted RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 KLK3P07288 261 aaPredicted RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 OR4E1P0C645 316 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 GNSP15586 552 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 ZBTB25P24278 435 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 PSMB6P28072 239 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 CORO1AP31146 461 aaKnown RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 ACVR1BP36896 505 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 NR0B2Q15466 257 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 GFOD2Q3B7J2 385 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 RAB12Q6IQ22 244 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 ZNF547Q8IVP9 402 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 FIBINQ8TAL6 211 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 NANPQ8TBE9 248 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 PEX11GQ96HA9 241 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 SAMD8Q96LT4 415 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 OCSTAMPQ9BR26 566 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 AP5M1Q9H0R1 490 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 TRPV2Q9Y5S1 764 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 FXYD6-FXYD2A0A087WZ82 144 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 TRBV5-5A0A0J9YX44 114 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 WASH3PC4AMC7 463 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 C9JQL5 133 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 LDLRAD4O15165 306 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 COCHO43405 550 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 SLC2A10O95528 541 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 PPT1P50897 306 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 PLAURQ03405 335 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 HMGN3Q15651 99 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 STEAP1BQ6NZ63 245 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 HEPN1Q6WQI6 88 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 WDR88Q6ZMY6 472 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 LRRTM1Q86UE6 522 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 CRIPAKQ8N1N5 446 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 OR10H4Q8NGA5 316 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 RAB24Q969Q5 203 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 RAB7BQ96AH8 199 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 MOAP1Q96BY2 351 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 KLF16Q9BXK1 252 aaPredicted RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 TINAGL1Q9GZM7 467 aaPredicted RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 FXYD6Q9H0Q3 95 aa4.69□□□□□ -1.66
RIF1-203ENST00000428287 H2AFY2Q9P0M6 372 aaPredicted RBP4.69□□□□□ -1.66
RIF1-203ENST00000428287 K7ERQ8 282 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 ZNF735P0CB33 412 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 ZNF35P13682 527 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 F3P13726 295 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms