RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 CCDC36Q8IYA8 594 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 ZNF786Q8N393 782 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 SCAIQ8N9R8 606 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 ZNF540Q8NDQ6 660 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 CKAP2Q8WWK9 683 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 SPDL1Q96EA4 605 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 SLC47A1Q96FL8 570 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 C1orf159Q96HA4 380 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 LRR1Q96L50 414 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 ANKRD27Q96NW4 1050 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 MRPL37Q9BZE1 423 aaKnown RBP8.66□□□□□ -1.02
GACAT3-201ENST00000426539 TMEM38AQ9H6F2 299 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 TCF7L2Q9NQB0 619 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 CCDC167Q9P0B6 97 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 TESQ9UGI8 421 aaKnown RBP8.66□□□□□ -1.02
GACAT3-201ENST00000426539 USP22Q9UPT9 525 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 CORINQ9Y5Q5 1042 aa8.66□□□□□ -1.02
GACAT3-201ENST00000426539 PLPP3O14495 311 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 AKAP8O43823 692 aaKnown RBP8.65□□□□□ -1.02
GACAT3-201ENST00000426539 MFN2O95140 757 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 LYPD3O95274 346 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 THY1P04216 161 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 B4GALT1P15291 398 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 NQO1P15559 274 aaKnown RBP8.65□□□□□ -1.02
GACAT3-201ENST00000426539 CAPZA2P47755 286 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 RGS8P57771 180 aaPredicted RBP8.65□□□□□ -1.02
GACAT3-201ENST00000426539 STX1BP61266 288 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 PIGFQ07326 219 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 MFSD13AQ14CX5 517 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 NPTX1Q15818 432 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 ELFN2Q5R3F8 820 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 DLEU7Q6UYE1 221 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 LINC00114Q6XXX2 140 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 WDR88Q6ZMY6 472 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 ZNF813Q6ZN06 617 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 KRT73Q86Y46 540 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 PTOV1Q86YD1 416 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 IL17RDQ8NFM7 739 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 GPR32P1Q8NGA4 272 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 FGFBP3Q8TAT2 258 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 UBASH3BQ8TF42 649 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 MRPL24Q96A35 216 aaKnown RBP8.65□□□□□ -1.02
GACAT3-201ENST00000426539 SNX18Q96RF0 628 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 ARHGDIGQ99819 225 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 CPPED1Q9BRF8 314 aaPredicted RBP8.65□□□□□ -1.02
GACAT3-201ENST00000426539 CCDC28BQ9BUN5 200 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 SPATA5L1Q9BVQ7 753 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 TPK1Q9H3S4 243 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 TMEM27Q9HBJ8 222 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 DYNLRB1Q9NP97 96 aa8.65□□□□□ -1.02
GACAT3-201ENST00000426539 MRPL39Q9NYK5 338 aaKnown RBP8.65□□□□□ -1.02
GACAT3-201ENST00000426539 FBXO9Q9UK97 447 aaPredicted RBP8.65□□□□□ -1.02
GACAT3-201ENST00000426539 SVEP1Q4LDE5 3571 aa8.65□□□□□ -1.03
GACAT3-201ENST00000426539 PRORSD1PA6NEY8 169 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 POM121CA8CG34 1229 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 M0R3H8 397 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 POLR3GO15318 223 aaPredicted RBP8.64□□□□□ -1.03
GACAT3-201ENST00000426539 ERLIN1O75477 346 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 TGDSO95455 350 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 PATE4P0C8F1 98 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 CD79AP11912 226 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 PPIBP23284 216 aaKnown RBP8.64□□□□□ -1.03
GACAT3-201ENST00000426539 SLC6A2P23975 617 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 APEX1P27695 318 aaKnown RBP8.64□□□□□ -1.03
GACAT3-201ENST00000426539 GIPRP48546 466 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 CHN2P52757 468 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 SEC24CP53992 1094 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 CDH15P55291 814 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 PCBP3P57721 371 aaKnown RBP8.64□□□□□ -1.03
GACAT3-201ENST00000426539 PUDPQ08623 228 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 PMS2P3Q13401 168 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 CAMK2DQ13557 499 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 SELPLGQ14242 412 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 FXNQ16595 210 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 DUSP7Q16829 419 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 GSG1Q2KHT4 349 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 AGKQ53H12 422 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 RUNDC3AQ59EK9 446 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 PXKQ7Z7A4 578 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 TSPYL5Q86VY4 417 aaPredicted RBP8.64□□□□□ -1.03
GACAT3-201ENST00000426539 LRP11Q86VZ4 500 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 CARM1Q86X55 608 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 ARMC8Q8IUR7 673 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 ZNF584Q8IVC4 421 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 SMYD1Q8NB12 490 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 OR4D11Q8NGI4 311 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 RNF217Q8TC41 542 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 EPYCQ99645 322 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 FOXB1Q99853 325 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 SYT3Q9BQG1 590 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 TMEM43Q9BTV4 400 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 ASPNQ9BXN1 380 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 ULBP2Q9BZM5 246 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 MYEF2Q9P2K5 600 aaKnown RBP8.64□□□□□ -1.03
GACAT3-201ENST00000426539 REV1Q9UBZ9 1251 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 POFUT2Q9Y2G5 429 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 CMAHPQ9Y471 501 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 NOX1Q9Y5S8 564 aa8.64□□□□□ -1.03
GACAT3-201ENST00000426539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.64□□□□□ -1.03
GACAT3-201ENST00000426539 VSTM5A8MXK1 200 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms