RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ACER2Q5QJU3 275 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 ARL9Q6T311 187 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 TMEM91Q6ZNR0 172 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 BTLAQ7Z6A9 289 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 SNX33Q8WV41 574 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 GNRHR2Q96P88 292 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 UBL7Q96S82 380 aaPredicted RBP23.82■■□□□ 1.4
LDB1-202ENST00000425280 MED18Q9BUE0 208 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 CCDC86Q9H6F5 360 aaKnown RBP23.82■■□□□ 1.4
LDB1-202ENST00000425280 GRIP1Q9Y3R0 1128 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 A0A1B0GVG6 124 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 CLEC2LP0C7M8 214 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 SDC2P34741 201 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 RORCP51449 518 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 HSF2Q03933 536 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 ALPK2Q86TB3 2170 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 MARCH9Q86YJ5 346 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 OR1J4Q8NGS1 313 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 PSMF1Q92530 271 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 PELI1Q96FA3 418 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 KCNS3Q9BQ31 491 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 TPK1Q9H3S4 243 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 AHCTF1Q8WYP5 2266 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 TVP23AA6NH52 213 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 CD8B2A6NJW9 211 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 STMND1H3BQB6 276 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 AKR7A3O95154 331 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 FTH1P19P0C7X4 201 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 CD8BP10966 210 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 GALP22466 123 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 DPP4P27487 766 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 SHC1P29353 583 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 SELENBP1Q13228 472 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 SLC25A46Q96AG3 418 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 FAM86C1Q9NVL1 165 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 ST6GALNAC2Q9UJ37 374 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 FKBP7Q9Y680 259 aa23.81■■□□□ 1.4
LDB1-202ENST00000425280 A0A075B6Q4 140 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 SPAARA0A1B0GVQ0 90 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 RGS9O75916 674 aaPredicted RBP23.8■■□□□ 1.4
LDB1-202ENST00000425280 CD53P19397 219 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 RUNX1T1Q06455 604 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 TIGD3Q6B0B8 471 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 DMKNQ6E0U4 476 aaPredicted RBP23.8■■□□□ 1.4
LDB1-202ENST00000425280 C16orf87Q6PH81 154 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 RAB43Q86YS6 212 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 GTPBP8Q8N3Z3 284 aaPredicted RBP23.8■■□□□ 1.4
LDB1-202ENST00000425280 SLC25A43Q8WUT9 341 aaPredicted RBP23.8■■□□□ 1.4
LDB1-202ENST00000425280 JSRP1Q96MG2 331 aaPredicted RBP23.8■■□□□ 1.4
LDB1-202ENST00000425280 C5orf34Q96MH7 638 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 B3GNT4Q9C0J1 378 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 PALMDQ9NP74 551 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 GNG8Q9UK08 70 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 B9D1Q9UPM9 204 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 B3GALT5Q9Y2C3 310 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 RPH3AQ9Y2J0 694 aaPredicted RBP23.8■■□□□ 1.4
LDB1-202ENST00000425280 SLC22A23A1A5C7 686 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 GPANK1O95872 356 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 GAAP10253 952 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 TGM4P49221 684 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 SLC3A1Q07837 685 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 ADAMTS17Q8TE56 1095 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 MRPL48Q96GC5 212 aaKnown RBP23.8■■□□□ 1.4
LDB1-202ENST00000425280 TMEM41AQ96HV5 264 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 THOC3Q96J01 351 aaKnown RBP23.8■■□□□ 1.4
LDB1-202ENST00000425280 OR5B2Q96R09 309 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 FAM117AQ9C073 453 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 PEX16Q9Y5Y5 336 aa23.8■■□□□ 1.4
LDB1-202ENST00000425280 A0A1W2PNR3 127 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 PRR32B1ATL7 298 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 SNX4O95219 450 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 IFNGR1P15260 489 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 GBX2P52951 348 aaPredicted RBP23.79■■□□□ 1.4
LDB1-202ENST00000425280 DSCR4P56555 118 aaPredicted RBP23.79■■□□□ 1.4
LDB1-202ENST00000425280 CDC20BQ86Y33 519 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 ASB10Q8WXI3 467 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 PGLYRP3Q96LB9 341 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 MARCH7Q9H992 704 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 IL17BQ9UHF5 180 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 KLHDC2Q9Y2U9 406 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 NPIPB13A6NJU9 1138 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 NPIPB4C9JG80 1138 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 NPIPA5E9PKD4 350 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 DVL2O14641 736 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 HSF1Q00613 529 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 ZNF684Q5T5D7 378 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 BEST3Q8N1M1 668 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 WDR76Q9H967 626 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 FANCFQ9NPI8 374 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 ACOXLQ9NUZ1 547 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 NPIPA1Q9UND3 350 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 POLHQ9Y253 713 aa23.79■■□□□ 1.4
LDB1-202ENST00000425280 OGG1O15527 345 aa23.78■■□□□ 1.4
LDB1-202ENST00000425280 ZIC3O60481 467 aa23.78■■□□□ 1.4
LDB1-202ENST00000425280 SLC16A7O60669 478 aa23.78■■□□□ 1.4
LDB1-202ENST00000425280 P04436 131 aa23.78■■□□□ 1.4
LDB1-202ENST00000425280 S100A5P33763 92 aa23.78■■□□□ 1.4
LDB1-202ENST00000425280 SFTPDP35247 375 aa23.78■■□□□ 1.4
LDB1-202ENST00000425280 DAP3P51398 398 aaKnown RBP23.78■■□□□ 1.4
LDB1-202ENST00000425280 POU3F1Q03052 451 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms