RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 HACD2Q6Y1H2 254 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 WDR88Q6ZMY6 472 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 FKBP9P1Q75LS8 142 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 PIGWQ7Z7B1 504 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 VTCN1Q7Z7D3 282 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 EPHX4Q8IUS5 362 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 UEVLDQ8IX04 471 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 OXGR1Q96P68 337 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 MOGAT1Q96PD6 335 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 ALKBH3Q96Q83 286 aaPredicted RBP11.29□□□□□ -0.6
VRK3-203ENST00000424804 CCT8L2Q96SF2 557 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 TMEM43Q9BTV4 400 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 ARL8BQ9NVJ2 186 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 MOKQ9UQ07 419 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 AMDHD2Q9Y303 409 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 ATP23Q9Y6H3 246 aa11.29□□□□□ -0.6
VRK3-203ENST00000424804 IGHV1-18A0A0C4DH31 117 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 RNF212BA8MTL3 300 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 ZNF587BE7ETH6 402 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 NDUFAB1O14561 156 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 GMNNO75496 209 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 F12P00748 615 aaPredicted RBP11.28□□□□□ -0.6
VRK3-203ENST00000424804 FAM157CP0CG43 387 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 ADORA3P0DMS8 318 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 SLC25A16P16260 332 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 IFNA8P32881 189 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 SELENOWP63302 87 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 POU3F1Q03052 451 aaPredicted RBP11.28□□□□□ -0.6
VRK3-203ENST00000424804 MFSD13AQ14CX5 517 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 CHRFAM7AQ494W8 412 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 C1QTNF12Q5T7M4 302 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 GKAP1Q5VSY0 366 aaPredicted RBP11.28□□□□□ -0.6
VRK3-203ENST00000424804 NKAIN4Q8IVV8 208 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 ARIH2OSQ8N7S6 290 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 POMGNT2Q8NAT1 580 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 FAM156AQ8NDB6 213 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 FAM168AQ92567 244 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 BCL2L2Q92843 193 aaPredicted RBP11.28□□□□□ -0.6
VRK3-203ENST00000424804 EMC6Q9BV81 110 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 SEC61A2Q9H9S3 476 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 SPAG4Q9NPE6 437 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 RHCGQ9UBD6 479 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 CRNNQ9UBG3 495 aaPredicted RBP11.28□□□□□ -0.6
VRK3-203ENST00000424804 TAGLN3Q9UI15 199 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 RIMS3Q9UJD0 308 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 POU2F3Q9UKI9 436 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 V9GYQ6 96 aa11.28□□□□□ -0.6
VRK3-203ENST00000424804 SLC35F4A4IF30 521 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 AKAP8O43823 692 aaKnown RBP11.27□□□□□ -0.61
VRK3-203ENST00000424804 SLC43A1O75387 559 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 UPK3AO75631 287 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 LYPD3O95274 346 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 HPRP00739 348 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 HIST1H2ABP04908 130 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 IFNW1P05000 195 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 IGFBP1P08833 259 aaPredicted RBP11.27□□□□□ -0.61
VRK3-203ENST00000424804 HLA-DOBP13765 273 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 PRPS1P60891 318 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 TGFBR3Q03167 851 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 PUDPQ08623 228 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 TBRG1Q3YBR2 411 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 IFI44LQ53G44 452 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 C8orf82Q6P1X6 216 aaPredicted RBP11.27□□□□□ -0.61
VRK3-203ENST00000424804 KLHL24Q6TFL4 600 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 HIST3H2AQ7L7L0 130 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 ABHD12BQ7Z5M8 362 aaPredicted RBP11.27□□□□□ -0.61
VRK3-203ENST00000424804 MYPOPQ86VE0 399 aaPredicted RBP11.27□□□□□ -0.61
VRK3-203ENST00000424804 GPR137CQ8N3F9 429 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 LRRC17Q8N6Y2 441 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 CCDC197Q8NCU1 140 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 OR1K1Q8NGR3 316 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 OR5J2Q8NH18 312 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 PFN4Q8NHR9 129 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 TMEM255BQ8WV15 326 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 HIST1H2ACQ93077 130 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 MPP4Q96JB8 637 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 HSH2DQ96JZ2 352 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 SORCS2Q96PQ0 1159 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 REPIN1Q9BWE0 567 aaKnown RBP11.27□□□□□ -0.61
VRK3-203ENST00000424804 NANSQ9NR45 359 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 MED29Q9NX70 200 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 CORINQ9Y5Q5 1042 aa11.27□□□□□ -0.61
VRK3-203ENST00000424804 ZNF503-AS2A6NEH8 195 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 ZNF726A6NNF4 738 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 MS4A18H0YCH9 400 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 BLOC1S5-TXNDC5H3BN57 136 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 J3KTA2 159 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 PHF1O43189 567 aaPredicted RBP11.26□□□□□ -0.61
VRK3-203ENST00000424804 RNF13O43567 381 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 ZNF432O94892 652 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 OR5F1O95221 314 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 MT-ATP6P00846 226 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 IFNA2P01563 188 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 IGLV1-44P01699 117 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 CALCRP30988 508 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 MSX2P35548 267 aaPredicted RBP11.26□□□□□ -0.61
VRK3-203ENST00000424804 UGT2B15P54855 530 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 ROR2Q01974 943 aaKnown RBP11.26□□□□□ -0.61
VRK3-203ENST00000424804 ZNF74Q16587 644 aa11.26□□□□□ -0.61
VRK3-203ENST00000424804 MS4A18Q3C1V0 323 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms