RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 HINT3Q9NQE9 182 aaKnown RBP11.95□□□□□ -0.5
PRPF39-202ENST00000424478 RPRD1BQ9NQG5 326 aaKnown RBP11.95□□□□□ -0.5
PRPF39-202ENST00000424478 MCTS1Q9ULC4 181 aaKnown RBP11.95□□□□□ -0.5
PRPF39-202ENST00000424478 TOXO94900 526 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 BCL10O95999 233 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 UQCRFS1P47985 274 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 SLC16A1P53985 500 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.94□□□□□ -0.5
PRPF39-202ENST00000424478 KRR1Q13601 381 aaKnown RBP11.94□□□□□ -0.5
PRPF39-202ENST00000424478 C12orf73Q69YU5 71 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 LAIR2Q6ISS4 152 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 NIPAL3Q6P499 406 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 DPY19L2P2Q6ZN68 376 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 SHFQ7M4L6 423 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 NUFIP2Q7Z417 695 aaKnown RBP11.94□□□□□ -0.5
PRPF39-202ENST00000424478 LNX2Q8N448 690 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 CNEP1R1Q8N9A8 125 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 RNF128Q8TEB7 428 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 ZNF837Q96EG3 531 aaPredicted RBP11.94□□□□□ -0.5
PRPF39-202ENST00000424478 DTNBP1Q96EV8 351 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 TIGARQ9NQ88 270 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 A0A1W2PRG6 482 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 SLC16A6O15403 523 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 XPNPEP2O43895 674 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 EIF1BO60739 113 aaKnown RBP11.94□□□□□ -0.5
PRPF39-202ENST00000424478 PYCR1P32322 319 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 PIGFQ07326 219 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 BCL2A1Q16548 175 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 KLHL12Q53G59 568 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 PDSS1Q5T2R2 415 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 OXGR1Q96P68 337 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 NAA11Q9BSU3 229 aaPredicted RBP11.94□□□□□ -0.5
PRPF39-202ENST00000424478 FLVCR1Q9Y5Y0 555 aa11.94□□□□□ -0.5
PRPF39-202ENST00000424478 SH3D21A4FU49 640 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 IGF2P01344 180 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 RPS27P42677 84 aaKnown RBP11.93□□□□□ -0.5
PRPF39-202ENST00000424478 PCYT1AP49585 367 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 RPL27P61353 136 aaKnown RBP11.93□□□□□ -0.5
PRPF39-202ENST00000424478 ISL1P61371 349 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 MFSD13AQ14CX5 517 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 EIF2S3LQ2VIR3 472 aaKnown RBP11.93□□□□□ -0.5
PRPF39-202ENST00000424478 KRTCAP3Q53RY4 240 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 NHLRC1Q6VVB1 395 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 PXKQ7Z7A4 578 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 SLC37A3Q8NCC5 494 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 NSMAFQ92636 917 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 PLEKHA8Q96JA3 519 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 LRR1Q96L50 414 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 ALKBH3Q96Q83 286 aaPredicted RBP11.93□□□□□ -0.5
PRPF39-202ENST00000424478 ARHGAP21Q5T5U3 1957 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 TRGV8A0A0C4DH27 118 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 FKBP2P26885 142 aaKnown RBP11.93□□□□□ -0.5
PRPF39-202ENST00000424478 FOXG1P55316 489 aaPredicted RBP11.93□□□□□ -0.5
PRPF39-202ENST00000424478 ARMC4Q5T2S8 1044 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 TTC23Q5W5X9 447 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 ABLIM2Q6H8Q1 611 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 USP51Q70EK9 711 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 ASB10Q8WXI3 467 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 PITX2Q99697 317 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 TXNIPQ9H3M7 391 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 CLCF1Q9UBD9 225 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 OSGIN2Q9Y236 505 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 SPTAN1Q13813 2472 aaKnown RBP11.93□□□□□ -0.5
PRPF39-202ENST00000424478 E9PQ18 207 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 M0R3G1 203 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 CYTIPO60759 359 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 ENTPD6O75354 484 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 WBP4O75554 376 aaKnown RBP11.93□□□□□ -0.5
PRPF39-202ENST00000424478 SFTPCP11686 197 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 SDHAP31040 664 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 CENPAP49450 140 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 CDC42P60953 191 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 C8orf59Q8N0T1 100 aaPredicted RBP11.93□□□□□ -0.5
PRPF39-202ENST00000424478 FAM57AQ8TBR7 257 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 PTP4A1Q93096 173 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 RDH12Q96NR8 316 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 SLC25A19Q9HC21 320 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 ASB6Q9NWX5 421 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 LRRC42Q9Y546 428 aa11.93□□□□□ -0.5
PRPF39-202ENST00000424478 A0A1W2PNV4 684 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 RPS6KA3P51812 740 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 ITGADQ13349 1161 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 VWA1Q6PCB0 445 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 MCEMP1Q8IX19 187 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 MARVELD2Q8N4S9 558 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 ARIH2OSQ8N7S6 290 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 NPEPL1Q8NDH3 523 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 OR6S1Q8NH40 331 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 ZNF519Q8TB69 540 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 ANKRD60Q9BZ19 345 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 TTTY10Q9BZA0 68 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 NUAK2Q9H093 628 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 RAB26Q9ULW5 256 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 UPK3AO75631 287 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 TRMUO75648 421 aaKnown RBP11.92□□□□□ -0.5
PRPF39-202ENST00000424478 MPZL1O95297 269 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 MRPL3P09001 348 aaKnown RBP11.92□□□□□ -0.5
PRPF39-202ENST00000424478 ACVR2AP27037 513 aa11.92□□□□□ -0.5
PRPF39-202ENST00000424478 TLE1Q04724 770 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms