RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 KIRREL2Q6UWL6 708 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 OR8H3Q8N146 312 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 PARP16Q8N5Y8 322 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 SIRT6Q8N6T7 355 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 C10orf53Q8N6V4 93 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM98AQ8NCA5 519 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 PAPD5Q8NDF8 572 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 OR2D3Q8NGH3 330 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 OR1L3Q8NH93 324 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 STOML3Q8TAV4 291 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 TCTEX1D2Q8WW35 142 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 XAGE5Q8WWM1 108 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 MAFIPQ8WZ33 124 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 SMPDL3BQ92485 455 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 BSCL2Q96G97 398 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 CENPNQ96H22 339 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 COL21A1Q96P44 957 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 FYTTD1Q96QD9 318 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 AGPAT1Q99943 283 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 NKX6-2Q9C056 277 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 EGLN1Q9GZT9 426 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 TOLLIPQ9H0E2 274 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 ATG10Q9H0Y0 220 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 GANQ9H2C0 597 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 FOLH1BQ9HBA9 442 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 TREM1Q9NP99 234 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 ADAP2Q9NPF8 381 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 POT1Q9NUX5 634 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 OPTCQ9UBM4 332 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 CLEC2DQ9UHP7 191 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 SERTAD3Q9UJW9 196 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 TSPAN16Q9UKR8 245 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 ING4Q9UNL4 249 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 HS3ST3B1Q9Y662 390 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 ALG6Q9Y672 507 aa4.94□□□□□ -1.62
ECHDC1-206ENST00000417628 EPPK1P58107 5090 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 A0A1B0GTH9 108 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 CIB4A0PJX0 185 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 A6NIZ1 184 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 TSTD3H0UI37 97 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 H0Y8G0 127 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 J3KTA2 159 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 M0QYV0 167 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF749O43361 778 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 FADS1O60427 444 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 VPS26AO75436 327 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 NCR1O76036 304 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 TRUB2O95900 331 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 IGLV3-25P01717 112 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 NR3C1P04150 777 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 GPIP06744 558 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 FGF4P08620 206 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 CD3GP09693 182 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 METTL15P1P0C7V9 234 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 PRR35P0CG20 571 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 ACP5P13686 325 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 PVALBP20472 110 aaPredicted RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 S1PR1P21453 382 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 PCMT1P22061 227 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 CCR1P32246 355 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 RFX2P48378 723 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 SLC1A6P48664 564 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 CSNK1DP48730 415 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 FHITP49789 147 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 ASCL1P50553 236 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 KPNA2P52292 529 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 NAGLUP54802 743 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 PRPS1P60891 318 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 RAB2AP61019 212 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 PKIAP61925 76 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 RAP1AP62834 184 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 VAMP2P63027 116 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 ERVK-25P63136 954 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 REEP5Q00765 189 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 SORDQ00796 357 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 TIAL1Q01085 375 aaKnown RBP eCLIP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 GPS1Q13098 491 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 BIKQ13323 160 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 GPR18Q14330 331 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 QPRTQ15274 297 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 GPR68Q15743 365 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 ACKR1Q16570 336 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 RBBP7Q16576 425 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 RFX4Q33E94 735 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 ADPRMQ3LIE5 342 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 CYBRD1Q53TN4 286 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 MTX3Q5HYI7 312 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 RABL3Q5HYI8 236 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 NHLRC3Q5JS37 347 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 GPRC6AQ5T6X5 926 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 C1orf189Q5VU69 101 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 TTC23Q5W5X9 447 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 SFRP4Q6FHJ7 346 aaPredicted RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 MED27Q6P2C8 311 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 IL20RBQ6UXL0 311 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 SLC16A14Q7RTX9 510 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 R3HCC1LQ7Z5L2 792 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 PEG10Q86TG7 708 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 DHFR2Q86XF0 187 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 PLD3Q8IV08 490 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms