RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 PAGE3Q5JUK9 113 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.45□□□□□ -0.425e-10■■■□□ 17.5
PAF1-202ENST00000416728 RANBP3LQ86VV4 465 aaPredicted RBP12.45□□□□□ -0.42
PAF1-202ENST00000416728 LINC01356Q8N9X3 169 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 BHLHE22Q8NFJ8 381 aaPredicted RBP12.45□□□□□ -0.42
PAF1-202ENST00000416728 MRPL24Q96A35 216 aaKnown RBP12.45□□□□□ -0.42
PAF1-202ENST00000416728 TXNDC15Q96J42 360 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 MOGAT1Q96PD6 335 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 ULBP2Q9BZM5 246 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 TMEM38AQ9H6F2 299 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 MRPL39Q9NYK5 338 aaKnown RBP12.45□□□□□ -0.42
PAF1-202ENST00000416728 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.45□□□□□ -0.42
PAF1-202ENST00000416728 GMEB1Q9Y692 573 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 EVPLLA8MZ36 301 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 HAX1O00165 279 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 SYNGR3O43761 229 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 ZNF500O60304 480 aaPredicted RBP12.44□□□□□ -0.42
PAF1-202ENST00000416728 SERPINI2O75830 405 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 RAB36O95755 333 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 AHCYP23526 432 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 PTDSS1P48651 473 aaKnown RBP12.44□□□□□ -0.42
PAF1-202ENST00000416728 EVX1P49640 407 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 IDH3AP50213 366 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 AQP5P55064 265 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 CDH12P55289 794 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 CAMK2DQ13557 499 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 RIN1Q13671 783 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 SWT1Q5T5J6 900 aaKnown RBP12.44□□□□□ -0.42
PAF1-202ENST00000416728 UGT2A3Q6UWM9 527 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 ZNF627Q7L945 461 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 ARMC8Q8IUR7 673 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 HIPK4Q8NE63 616 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 FOXB1Q99853 325 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 TMEM43Q9BTV4 400 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 MRPL37Q9BZE1 423 aaKnown RBP12.44□□□□□ -0.42
PAF1-202ENST00000416728 IKZF5Q9H5V7 419 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 EVA1AQ9H8M9 152 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 REV1Q9UBZ9 1251 aa12.44□□□□□ -0.42
PAF1-202ENST00000416728 TMEFF2Q9UIK5 374 aaPredicted RBP12.44□□□□□ -0.42
PAF1-202ENST00000416728 TRBV5-3A0A0A0MS03 114 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 LRRN3E7EW58 273 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 LYNX1G3V0Z9 82 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 PLPP3O14495 311 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 TPST2O60704 377 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 ERLIN1O75477 346 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 LYNX1P0DP58 116 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 ZNF35P13682 527 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 ZNF14P17017 642 aaPredicted RBP12.43□□□□□ -0.42
PAF1-202ENST00000416728 GPX2P18283 190 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 GLRXP35754 106 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 SRP14P37108 136 aaKnown RBP12.43□□□□□ -0.42
PAF1-202ENST00000416728 GIPRP48546 466 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 CDH15P55291 814 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 RPS23P62266 143 aaKnown RBP12.43□□□□□ -0.42
PAF1-202ENST00000416728 GALK2Q01415 458 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 TRIP10Q15642 601 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 GKAP1Q5VSY0 366 aaPredicted RBP12.43□□□□□ -0.42
PAF1-202ENST00000416728 NHLRC1Q6VVB1 395 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 PXKQ7Z7A4 578 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 RFLNBQ8N5W9 214 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 LRRC8CQ8TDW0 803 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 ZNF75AQ96N20 296 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 EBF4Q9BQW3 602 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 CCDC28BQ9BUN5 200 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 MS4A5Q9H3V2 200 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 DENND2DQ9H6A0 471 aaPredicted RBP12.43□□□□□ -0.42
PAF1-202ENST00000416728 SLC52A3Q9NQ40 469 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 ANGPT4Q9Y264 503 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 SVEP1Q4LDE5 3571 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 MFN2O95140 757 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 UBL3O95164 117 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 OR6A2O95222 327 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 MT-ATP6P00846 226 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 C8BP07358 591 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 ADORA3P0DMS8 318 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 LSP1P33241 339 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 CSNK1A1P48729 337 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 RAB1AP62820 205 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 CCNIQ14094 377 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 MSMPQ1L6U9 139 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 AGKQ53H12 422 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 WDFY1Q8IWB7 410 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 SMYD1Q8NB12 490 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 OR5J2Q8NH18 312 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 MCHR1Q99705 422 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 SYT3Q9BQG1 590 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 WFDC6Q9BQY6 131 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 SLCO1B3Q9NPD5 702 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 ZNF224Q9NZL3 707 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 FBXL3Q9UKT7 428 aa12.43□□□□□ -0.42
PAF1-202ENST00000416728 C11orf98E9PRG8 122 aa12.42□□□□□ -0.42
PAF1-202ENST00000416728 M0R3H8 397 aa12.42□□□□□ -0.42
PAF1-202ENST00000416728 TCF21O43680 179 aa12.42□□□□□ -0.42
PAF1-202ENST00000416728 FMO6PO60774 539 aa12.42□□□□□ -0.42
PAF1-202ENST00000416728 TCN1P20061 433 aaPredicted RBP12.42□□□□□ -0.42
PAF1-202ENST00000416728 PCMT1P22061 227 aa12.42□□□□□ -0.42
PAF1-202ENST00000416728 ALDH3B1P43353 468 aa12.42□□□□□ -0.42
PAF1-202ENST00000416728 ATP4BP51164 291 aa12.42□□□□□ -0.42
PAF1-202ENST00000416728 BIDP55957 195 aa12.42□□□□□ -0.42
PAF1-202ENST00000416728 REP15Q6BDI9 236 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms