RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SERINC1Q9NRX5 453 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 PLSCR3Q9NRY6 295 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 NDUFB11Q9NX14 153 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 BOLA1Q9Y3E2 137 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 A0A1B0GWA3 101 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 OR2M5A3KFT3 312 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 TRAPPC13A5PLN9 417 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 OR14I1A6ND48 311 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 AQP7O14520 342 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 OR5F1O95221 314 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 PNMTP11086 282 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 M6PRP20645 277 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 TACR3P29371 465 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 CRYBB2P43320 205 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 TDGF1P3P51864 188 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 B3GALT5-AS1P59052 145 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 TAS2R41P59536 307 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 MLLT11Q13015 90 aaPredicted RBP13.06□□□□□ -0.32
SGCE-202ENST00000415788 TNK1Q13470 666 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 SPHARQ15513 63 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 PRR30Q53SZ7 412 aaPredicted RBP13.06□□□□□ -0.32
SGCE-202ENST00000415788 ALG10BQ5I7T1 473 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 FAM131AQ6UXB0 335 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 LAX1Q8IWV1 398 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 POC1BQ8TC44 478 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 SLC25A46Q96AG3 418 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 C3orf49Q96BT1 292 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 TAS2R16Q9NYV7 291 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 NUFIP1Q9UHK0 495 aaKnown RBP13.06□□□□□ -0.32
SGCE-202ENST00000415788 SPIN1Q9Y657 262 aaPredicted RBP13.06□□□□□ -0.32
SGCE-202ENST00000415788 ENPP4Q9Y6X5 453 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 DSPP15924 2871 aaKnown RBP13.06□□□□□ -0.32
SGCE-202ENST00000415788 A0A0B4J2E0 115 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 A0A1B0GX12 115 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 CPSF4LA6NMK7 179 aaKnown RBP13.06□□□□□ -0.32
SGCE-202ENST00000415788 GJE1A6NN92 205 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 EDN3P14138 238 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 RHCEP18577 417 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 RAC1P63000 192 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 FAPQ12884 760 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 C1DQ13901 141 aaKnown RBP13.06□□□□□ -0.32
SGCE-202ENST00000415788 C3orf33Q6P1S2 294 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 PROKR2Q8NFJ6 384 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 OR52J3Q8NH60 311 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 SLC25A43Q8WUT9 341 aaPredicted RBP13.06□□□□□ -0.32
SGCE-202ENST00000415788 SARAFQ96BY9 339 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 ZNF524Q96C55 264 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 ZC3HAV1LQ96H79 300 aaKnown RBP13.06□□□□□ -0.32
SGCE-202ENST00000415788 MMP28Q9H239 520 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 TIGARQ9NQ88 270 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 SNTG1Q9NSN8 517 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 RPL36Q9Y3U8 105 aaKnown RBP13.06□□□□□ -0.32
SGCE-202ENST00000415788 LIPGQ9Y5X9 500 aa13.06□□□□□ -0.32
SGCE-202ENST00000415788 FABP12A6NFH5 140 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 B8ZZF3 427 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 CHP2O43745 196 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 GADD45GO95257 159 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 C1QBP02746 253 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 CSF3P09919 207 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 PEPDP12955 493 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 ST3GAL3Q11203 375 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 SMUG1Q53HV7 270 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 ZMAT1Q5H9K5 638 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 VASNQ6EMK4 673 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 ATG4DQ86TL0 474 aaPredicted RBP13.05□□□□□ -0.32
SGCE-202ENST00000415788 OR9Q2Q8NGE9 314 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 ENKURQ8TC29 256 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 MED18Q9BUE0 208 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 C11orf54Q9H0W9 315 aaPredicted RBP13.05□□□□□ -0.32
SGCE-202ENST00000415788 CTPS2Q9NRF8 586 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 CHRNA9Q9UGM1 479 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 ACAD8Q9UKU7 415 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 TMA7Q9Y2S6 64 aaKnown RBP13.05□□□□□ -0.32
SGCE-202ENST00000415788 SLC6A5Q9Y345 797 aa13.05□□□□□ -0.32
SGCE-202ENST00000415788 TMED7-TICAM2A0A0A6YYA0 188 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 ELOA3DA6NLF2 546 aaPredicted RBP13.04□□□□□ -0.32
SGCE-202ENST00000415788 SHISA8B8ZZ34 492 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 ZNF208O43345 1280 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 TMCC2O75069 709 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 ZNF780AO75290 641 aaPredicted RBP13.04□□□□□ -0.32
SGCE-202ENST00000415788 SEMA7AO75326 666 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 ADAP00813 363 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 BMP7P18075 431 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 POU3F2P20265 443 aaPredicted RBP13.04□□□□□ -0.32
SGCE-202ENST00000415788 CXCR1P25024 350 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 AZGP1P25311 298 aaKnown RBP13.04□□□□□ -0.32
SGCE-202ENST00000415788 GZMKP49863 264 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 RAB25P57735 213 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 ELOA3BQ3SY89 546 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 Q5BKY6 102 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 DDI2Q5TDH0 399 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 LCN1P1Q5VSP4 162 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 UTS2BQ765I0 119 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 ADGRG3Q86Y34 549 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 NANOGP1Q8N7R0 232 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 ELOA3Q8NG57 546 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 OR5M1Q8NGP8 315 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 AP3S1Q92572 193 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 SLC41A3Q96GZ6 507 aa13.04□□□□□ -0.32
SGCE-202ENST00000415788 FYTTD1Q96QD9 318 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms