RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TMPRSS13Q9BYE2 586 aa13.17□□□□□ -0.3
DDX56-202ENST00000415758 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
DDX56-202ENST00000415758 B3GAT2Q9NPZ5 323 aa13.17□□□□□ -0.3
DDX56-202ENST00000415758 KLHL14Q9P2G3 628 aa13.17□□□□□ -0.3
DDX56-202ENST00000415758 RPS6KB2Q9UBS0 482 aa13.17□□□□□ -0.3
DDX56-202ENST00000415758 SLC7A8Q9UHI5 535 aa13.17□□□□□ -0.3
DDX56-202ENST00000415758 DUSP13Q9UII6 198 aa13.17□□□□□ -0.3
DDX56-202ENST00000415758 POFUT2Q9Y2G5 429 aa13.17□□□□□ -0.3
DDX56-202ENST00000415758 CORINQ9Y5Q5 1042 aa13.17□□□□□ -0.3
DDX56-202ENST00000415758 TRRAPQ9Y4A5 3859 aa13.17□□□□□ -0.3
DDX56-202ENST00000415758 LOC105371242A0A075B767 164 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 A0A087WUJ7 227 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 J3QLI3 93 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 TM9SF1O15321 606 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 UBL3O95164 117 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 SERPINA5P05154 406 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 NAT2P11245 290 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 BMP2P12643 396 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 B4GALT1P15291 398 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 GIPRP48546 466 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 PTDSS1P48651 473 aaKnown RBP13.16□□□□□ -0.3
DDX56-202ENST00000415758 AQP5P55064 265 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 STX3Q13277 289 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 AWAT1Q58HT5 328 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 CARD17Q5XLA6 110 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 PIWIL3Q7Z3Z3 882 aaKnown RBP13.16□□□□□ -0.3
DDX56-202ENST00000415758 MGARPQ8TDB4 240 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 FOXB1Q99853 325 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 SUCNR1Q9BXA5 334 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 RSPO3Q9BXY4 272 aaPredicted RBP13.16□□□□□ -0.3
DDX56-202ENST00000415758 ZNF665Q9H7R5 613 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 NKIRAS2Q9NYR9 191 aa13.16□□□□□ -0.3
DDX56-202ENST00000415758 IGLV3-9A0A075B6K5 115 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 A0A0G2JMP0 313 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 A0A0X1KG70 313 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 A0A1B0GWA3 101 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 C17orf100A8MU93 164 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 PLPP2O43688 288 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 DEAF1O75398 565 aaPredicted RBP13.15□□□□□ -0.3
DDX56-202ENST00000415758 SLC22A3O75751 556 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 MPZL1O95297 269 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 ANP32DO95626 131 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 RAB36O95755 333 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 NQO1P15559 274 aaKnown RBP13.15□□□□□ -0.3
DDX56-202ENST00000415758 HTR2AP28223 471 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 PRKAR1BP31321 381 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 CRYBB2P43320 205 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 MAGEB1P43366 347 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 RAB39AQ14964 217 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 RGNQ15493 299 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 ALG10BQ5I7T1 473 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 FAM91A1Q658Y4 838 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 ULK3Q6PHR2 472 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 MSANTD1Q6ZTZ1 278 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 PXKQ7Z7A4 578 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 ZNF584Q8IVC4 421 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 WDFY1Q8IWB7 410 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 ZDHHC22Q8N966 263 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 OR4M2Q8NGB6 313 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 VPS33AQ96AX1 596 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 TXNDC15Q96J42 360 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 ZNF747Q9BV97 191 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 ULBP2Q9BZM5 246 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 ZNF696Q9H7X3 374 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 A4GALTQ9NPC4 353 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 MED29Q9NX70 200 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 GPR160Q9UJ42 338 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 FZR1Q9UM11 496 aa13.15□□□□□ -0.3
DDX56-202ENST00000415758 A0A1W2PPW3 197 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 SLC22A23A1A5C7 686 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 BGLAPP02818 100 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 IDO1P14902 403 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 ETS2P15036 469 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 ZNF250P15622 560 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 BGNP21810 368 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 GATA3P23771 443 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 EPHA3P29320 983 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 CAMK2DQ13557 499 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 PCGF3Q3KNV8 242 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 GTDC1Q4AE62 458 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 GLIPR1L2Q4G1C9 344 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 OR6N1Q8NGY5 312 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 BBS10Q8TAM1 723 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 NANPQ8TBE9 248 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 RAB39BQ96DA2 213 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 SLC47A1Q96FL8 570 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 ITCHQ96J02 903 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 EPYCQ99645 322 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 WDR55Q9H6Y2 383 aaPredicted RBP13.14□□□□□ -0.31
DDX56-202ENST00000415758 RMND5AQ9H871 391 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 ESM1Q9NQ30 184 aa13.14□□□□□ -0.31
DDX56-202ENST00000415758 HINT3Q9NQE9 182 aaKnown RBP13.14□□□□□ -0.31
DDX56-202ENST00000415758 MRPL39Q9NYK5 338 aaKnown RBP13.14□□□□□ -0.31
DDX56-202ENST00000415758 ZNF726A6NNF4 738 aa13.13□□□□□ -0.31
DDX56-202ENST00000415758 HDAC3O15379 428 aa13.13□□□□□ -0.31
DDX56-202ENST00000415758 TMPRSS2O15393 492 aa13.13□□□□□ -0.31
DDX56-202ENST00000415758 BCL10O95999 233 aa13.13□□□□□ -0.31
DDX56-202ENST00000415758 NUDT7P0C024 238 aa13.13□□□□□ -0.31
DDX56-202ENST00000415758 CBLP22681 906 aa13.13□□□□□ -0.31
DDX56-202ENST00000415758 LSP1P33241 339 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms