RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 SERPINA12Q8IW75 414 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 OR9K2Q8NGE7 335 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 OR6M1Q8NGM8 313 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 RNF128Q8TEB7 428 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 SPACA9Q96E40 222 aaPredicted RBP10.97□□□□□ -0.65
PTPRF-205ENST00000414879 THAP7Q9BT49 309 aaPredicted RBP10.97□□□□□ -0.65
PTPRF-205ENST00000414879 S1PR5Q9H228 398 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 C14orf119Q9NWQ9 140 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF223Q9UK11 482 aaPredicted RBP10.97□□□□□ -0.65
PTPRF-205ENST00000414879 UGT2A1Q9Y4X1 527 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 PCDHGA6Q9Y5G7 932 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 SCN10AQ9Y5Y9 1956 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 SHROOM3Q8TF72 1996 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 SC5DO75845 299 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 MSR1P21757 451 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 ADH6P28332 368 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 ISL1P61371 349 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 HSF1Q00613 529 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 KCNJ8Q15842 424 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 TCTN3Q6NUS6 607 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 PRSS42Q7Z5A4 293 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 MGAT4CQ9UBM8 478 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 EDARQ9UNE0 448 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 RNF212BA8MTL3 300 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 TNFSF14O43557 240 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 SEC14L2O76054 403 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 DIO1P49895 249 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 LTBQ06643 244 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 DMWDQ09019 674 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 GALEQ14376 348 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 LPCAT3Q6P1A2 487 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 NPSR1Q6W5P4 371 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 OR8H3Q8N146 312 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 ABHD4Q8TB40 342 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 NDNFQ8TB73 568 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 LOXL4Q96JB6 756 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 ARHGDIGQ99819 225 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 ERVK13-1Q9NX77 482 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 CSO75390 466 aaKnown RBP10.96□□□□□ -0.65
PTPRF-205ENST00000414879 SULT1C4O75897 302 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 TNFSF15O95150 251 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 SBK2P0C263 348 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 OR8G3PP0DMU2 310 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 ARR3P36575 388 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 RPP30P78346 268 aaKnown RBP10.96□□□□□ -0.65
PTPRF-205ENST00000414879 EGR3Q06889 387 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 STK11Q15831 433 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 FAM57BQ71RH2 274 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 TEAD3Q99594 435 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 PSD2Q9BQI7 771 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 LRFN1Q9P244 771 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 ZNFX1Q9P2E3 1918 aaKnown RBP10.96□□□□□ -0.65
PTPRF-205ENST00000414879 PTPRFP10586 1907 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 LOC100509620A0A075B734 347 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 PLATP00750 562 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 TFAP2AP05549 437 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 CHRM2P08172 466 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 IL7P13232 177 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 CD82P27701 267 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 CCL11P51671 97 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 TBC1D28Q2M2D7 210 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 DOK3Q7L591 496 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 NANOGP1Q8N7R0 232 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 GHSRQ92847 366 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 EID2BQ96D98 161 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 JAM3Q9BX67 310 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 TXNIPQ9H3M7 391 aa10.96□□□□□ -0.65
PTPRF-205ENST00000414879 HTR2CP28335 458 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 ALDH3B2P48448 385 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 ERVK-16P61578 105 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 MOB3CQ70IA8 216 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 OVCH1Q7RTY7 1134 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 DPY19L4Q7Z388 723 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF547Q8IVP9 402 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 TBC1D15Q8TC07 691 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 TMIGD2Q96BF3 282 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 MENTQ9BUN1 341 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 PLAC1Q9HBJ0 212 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF286AQ9HBT8 521 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 MED16Q9Y2X0 877 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 SHISA7A6NL88 538 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 M0R296 226 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 PRRG2O14669 202 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 UBL3O95164 117 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 B3GALT4O96024 378 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 MT-CO3P00414 261 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 CRYABP02511 175 aaKnown RBP10.96□□□□□ -0.66
PTPRF-205ENST00000414879 OPRL1P41146 370 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 DSCR4P56555 118 aaPredicted RBP10.96□□□□□ -0.66
PTPRF-205ENST00000414879 PPA1Q15181 289 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 SYT14P1Q58G82 188 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 FAM198BQ6UWH4 519 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 NKAIN4Q8IVV8 208 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 RSPRY1Q96DX4 576 aa10.96□□□□□ -0.66
PTPRF-205ENST00000414879 CPT2P23786 658 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 PHC1P78364 1004 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 BTG2P78543 158 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 AIMP2Q13155 320 aaKnown RBP10.95□□□□□ -0.66
PTPRF-205ENST00000414879 TOMM34Q15785 309 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-205ENST00000414879 TSLPQ969D9 159 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms