RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 FFAR1O14842 300 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 SIAH2O43255 324 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 TMCC2O75069 709 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 ATP5HO75947 161 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 PRSS23O95084 383 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 GADD45GO95257 159 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 AQP2P41181 271 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 ZNF83P51522 516 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 IST1P53990 364 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 BSPH1Q075Z2 132 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 FAM98BQ52LJ0 330 aaKnown RBP12.9□□□□□ -0.34
CHD1-202ENST00000414220 ADAM5Q6NVV9 412 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 CYP2R1Q6VVX0 501 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 TMPRSS11FQ6ZWK6 438 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 FNDC8Q8TC99 324 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 NANOS1Q8WY41 292 aaKnown RBP12.9□□□□□ -0.34
CHD1-202ENST00000414220 NRGNQ92686 78 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 C7orf34Q96L11 122 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 HS3ST6Q96QI5 342 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 IL1RAPQ9NPH3 570 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 FAIMQ9NVQ4 179 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 GLTPQ9NZD2 209 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 POU2F3Q9UKI9 436 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 HIF3AQ9Y2N7 669 aa12.9□□□□□ -0.34
CHD1-202ENST00000414220 ITPR2Q14571 2701 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 ARPC4-TTLL3A0A0A6YYG9 625 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 A0A1W2PR80 420 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 DPRXA6NFQ7 191 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 ABCD4O14678 606 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 PIP5K1CO60331 668 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 KRT36O76013 467 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 UBOX5O94941 541 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 F13BP05160 661 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 HOXB6P17509 224 aaKnown RBP12.89□□□□□ -0.35
CHD1-202ENST00000414220 RPL4P36578 427 aaKnown RBP12.89□□□□□ -0.35
CHD1-202ENST00000414220 CAPZA2P47755 286 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 ZNF84P51523 738 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 ART1P52961 327 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 ARF1P84077 181 aaKnown RBP12.89□□□□□ -0.35
CHD1-202ENST00000414220 VLDLRP98155 873 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 SPIBQ01892 262 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 CHRNB3Q05901 458 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 LGALS3BPQ08380 585 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 HIKESHIQ53FT3 197 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 FAM205BPQ63HN1 556 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 LCN8Q6JVE9 175 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 PODNL1Q6PEZ8 512 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 ZDHHC21Q8IVQ6 265 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 ZNF611Q8N823 705 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 WDR31Q8NA23 367 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 OR51A7Q8NH64 312 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 SLC7A13Q8TCU3 470 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 AKAP1Q92667 903 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHD1-202ENST00000414220 BCL2L2Q92843 193 aaPredicted RBP12.89□□□□□ -0.35
CHD1-202ENST00000414220 FBXW5Q969U6 566 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 MBD6Q96DN6 1003 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 ASB9Q96DX5 294 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 SEPHS2Q99611 448 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 CCL19Q99731 98 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 BTBD10Q9BSF8 475 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 TMEM204Q9BSN7 226 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 LIME1Q9H400 295 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 MAGIXQ9H6Y5 334 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 MAN2C1Q9NTJ4 1040 aa12.89□□□□□ -0.35
CHD1-202ENST00000414220 CCM2LQ9NUG4 571 aaPredicted RBP12.89□□□□□ -0.35
CHD1-202ENST00000414220 BEX4Q9NWD9 120 aaPredicted RBP12.89□□□□□ -0.35
CHD1-202ENST00000414220 FREM1Q5H8C1 2179 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 NAV2Q8IVL1 2488 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 NBPF19A0A087WUL8 3843 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 A0A096LPE4 126 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 A0A1W2PPZ6 126 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 A6NIZ1 184 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 NPIPB13A6NJU9 1138 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 NPIPB4C9JG80 1138 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 HS3ST1O14792 307 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 MGRN1O60291 552 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 PDE5AO76074 875 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 FARS2O95363 451 aaKnown RBP12.88□□□□□ -0.35
CHD1-202ENST00000414220 ACADSP16219 412 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 MAKP20794 623 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 CD40P25942 277 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 LOXP28300 417 aaPredicted RBP12.88□□□□□ -0.35
CHD1-202ENST00000414220 GUCA1AP43080 201 aaPredicted RBP12.88□□□□□ -0.35
CHD1-202ENST00000414220 CTXN1P60606 82 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 RAP1BP61224 184 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 RAP1AP62834 184 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 TRAP1Q12931 704 aaKnown RBP12.88□□□□□ -0.35
CHD1-202ENST00000414220 MELKQ14680 651 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 LAPTM4AQ15012 233 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 TBPL2Q6SJ96 375 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 SLC22A25Q6T423 547 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 NHLRC1Q6VVB1 395 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 ZNF813Q6ZN06 617 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 LINC00471Q8N535 108 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 FAM86B1Q8N7N1 296 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 OR52J3Q8NH60 311 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 TMEM171Q8WVE6 324 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 TMEM54Q969K7 222 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 ALPK1Q96QP1 1244 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 RBP7Q96R05 134 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms