RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 NMNAT3Q96T66 252 aa23.03■■□□□ 1.28
RHBDD3-203ENST00000413137 TP63Q9H3D4 680 aaPredicted RBP23.03■■□□□ 1.28
RHBDD3-203ENST00000413137 ZNF226Q9NYT6 803 aa23.03■■□□□ 1.28
RHBDD3-203ENST00000413137 FAM208BQ5VWN6 2430 aa23.03■■□□□ 1.28
RHBDD3-203ENST00000413137 POLEQ07864 2286 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 NPIPB13A6NJU9 1138 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 NPIPB4C9JG80 1138 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 IDH3BO43837 385 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 SELENOPP49908 381 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 DAP3P51398 398 aaKnown RBP23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 CAMK2DQ13557 499 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 KRR1Q13601 381 aaKnown RBP23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 IGFBP7Q16270 282 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 SOWAHCQ53LP3 525 aaPredicted RBP23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 CARD17Q5XLA6 110 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 GPR139Q6DWJ6 353 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 NCCRP1Q6ZVX7 275 aaPredicted RBP23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 MCEMP1Q8IX19 187 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 ZNF843Q8N446 348 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 TCEANCQ8N8B7 351 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 CYB561A3Q8NBI2 242 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 SDR9C7Q8NEX9 313 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 DDOQ99489 341 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 CMC2Q9NRP2 79 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 RAB26Q9ULW5 256 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 RNF6Q9Y252 685 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 PCDHGB5Q9Y5G0 923 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 RELNP78509 3460 aa23.02■■□□□ 1.28
RHBDD3-203ENST00000413137 MBD3L4A6NDZ8 208 aaPredicted RBP23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 MBD3L3A6NE82 208 aaPredicted RBP23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 MBD3L5A6NJ08 208 aaPredicted RBP23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 ARHGEF9O43307 516 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 ZNF432O94892 652 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 PCYT1AP49585 367 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 TLE1Q04724 770 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 FOXF2Q12947 444 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 CASP12Q6UXS9 341 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 B3GNT6Q6ZMB0 384 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 NUFIP2Q7Z417 695 aaKnown RBP23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 BCDIN3DQ7Z5W3 292 aaKnown RBP23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 ENTHD1Q8IYW4 607 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 MARVELD2Q8N4S9 558 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 SLC37A3Q8NCC5 494 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 MBD3L2Q8NHZ7 208 aaPredicted RBP23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 INTS12Q96CB8 462 aaKnown RBP23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 TTYH2Q9BSA4 534 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 RASSF1Q9NS23 344 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 MED12LQ86YW9 2145 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 FAM183AA6NL82 134 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 ZNF724A8MTY0 619 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 TRMUO75648 421 aaKnown RBP23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 HMGN1P05114 100 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 YES1P07947 543 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 GLI4P10075 376 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 CDC42P60953 191 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 LGALS3BPQ08380 585 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 CRMP1Q14194 572 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 SF3B4Q15427 424 aaKnown RBP eCLIP23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 GUSBP1Q15486 140 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 GTF2IRD2BQ6EKJ0 949 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 NIPAL3Q6P499 406 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 GTF2IRD2Q86UP8 949 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 SYT14Q8NB59 555 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 NAXEQ8NCW5 288 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 NPEPL1Q8NDH3 523 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 OR6X1Q8NH79 312 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 OR2M2Q96R28 347 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 HCAR1Q9BXC0 346 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 MED20Q9H944 212 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 OSGIN2Q9Y236 505 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 LRRC42Q9Y546 428 aa23.01■■□□□ 1.27
RHBDD3-203ENST00000413137 TLX2O43763 284 aaPredicted RBP23■■□□□ 1.27
RHBDD3-203ENST00000413137 AGTR1P30556 359 aa23■■□□□ 1.27
RHBDD3-203ENST00000413137 LEG1Q6P5S2 330 aa23■■□□□ 1.27
RHBDD3-203ENST00000413137 TMEM123Q8N131 208 aa23■■□□□ 1.27
RHBDD3-203ENST00000413137 GMPPAQ96IJ6 420 aaPredicted RBP23■■□□□ 1.27
RHBDD3-203ENST00000413137 SLC38A2Q96QD8 506 aa23■■□□□ 1.27
RHBDD3-203ENST00000413137 ANKRD60Q9BZ19 345 aa23■■□□□ 1.27
RHBDD3-203ENST00000413137 FN3KQ9H479 309 aa23■■□□□ 1.27
RHBDD3-203ENST00000413137 NOSIPQ9Y314 301 aaKnown RBP23■■□□□ 1.27
RHBDD3-203ENST00000413137 TRGV8A0A0C4DH27 118 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 OR6C68A6NDL8 312 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 B8ZZF3 427 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 SS18L1O75177 396 aaPredicted RBP22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 HOXD4P09016 255 aaPredicted RBP22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 ACADSP16219 412 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 GABRB1P18505 474 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 ISL1P61371 349 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 ITGADQ13349 1161 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 AAED1Q7RTV5 226 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 KCNK17Q96T54 332 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 TM9SF2Q99805 663 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 MRPL13Q9BYD1 178 aaKnown RBP22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 HINT3Q9NQE9 182 aaKnown RBP22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 IMPAD1Q9NX62 359 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 EMC3Q9P0I2 261 aa22.99■■□□□ 1.27
RHBDD3-203ENST00000413137 ZNF726A6NNF4 738 aa22.98■■□□□ 1.27
RHBDD3-203ENST00000413137 RIIAD1A6NNX1 92 aa22.98■■□□□ 1.27
RHBDD3-203ENST00000413137 GPR171O14626 319 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms