RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 FFAR1O14842 300 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 ARHGEF9O43307 516 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 SEC14L2O76054 403 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 TCN1P20061 433 aaPredicted RBP16.45■□□□□ 0.22
TRIM56-202ENST00000412507 RPS4XP62701 263 aaKnown RBP16.45■□□□□ 0.22
TRIM56-202ENST00000412507 MELKQ14680 651 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 PGGHGQ32M88 737 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 Q5PR19 223 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 SHEQ5VZ18 495 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 OFCC1Q8IZS5 231 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 ANKS4BQ8N8V4 417 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 MAGEE2Q8TD90 523 aaPredicted RBP16.45■□□□□ 0.22
TRIM56-202ENST00000412507 FNDC11Q9BVV2 318 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 CXorf56Q9H5V9 222 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 B3GAT2Q9NPZ5 323 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 POU2F3Q9UKI9 436 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 MTORP42345 2549 aa16.45■□□□□ 0.22
TRIM56-202ENST00000412507 CHD3Q12873 2000 aaKnown RBP16.45■□□□□ 0.22
TRIM56-202ENST00000412507 ZNF99A8MXY4 864 aaPredicted RBP16.44■□□□□ 0.22
TRIM56-202ENST00000412507 E7EQL1 145 aa16.44■□□□□ 0.22
TRIM56-202ENST00000412507 IGF2P01344 180 aa16.44■□□□□ 0.22
TRIM56-202ENST00000412507 HOXB1P14653 301 aaPredicted RBP16.44■□□□□ 0.22
TRIM56-202ENST00000412507 CSNK1A1P48729 337 aa16.44■□□□□ 0.22
TRIM56-202ENST00000412507 LSM11P83369 360 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRIM56-202ENST00000412507 RPL18Q07020 188 aaKnown RBP16.44■□□□□ 0.22
TRIM56-202ENST00000412507 B3GLCTQ6Y288 498 aa16.44■□□□□ 0.22
TRIM56-202ENST00000412507 PGAM4Q8N0Y7 254 aa16.44■□□□□ 0.22
TRIM56-202ENST00000412507 DEPDC4Q8N2C3 294 aa16.44■□□□□ 0.22
TRIM56-202ENST00000412507 OR6X1Q8NH79 312 aa16.44■□□□□ 0.22
TRIM56-202ENST00000412507 ADAD1Q96M93 576 aaKnown RBP16.44■□□□□ 0.22
TRIM56-202ENST00000412507 GSX2Q9BZM3 304 aa16.44■□□□□ 0.22
TRIM56-202ENST00000412507 ULBP2Q9BZM5 246 aa16.44■□□□□ 0.22
TRIM56-202ENST00000412507 MAN2C1Q9NTJ4 1040 aa16.44■□□□□ 0.22
TRIM56-202ENST00000412507 RPS6KA6Q9UK32 745 aa16.44■□□□□ 0.22
TRIM56-202ENST00000412507 IGHV1-18A0A0C4DH31 117 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 TMCC2O75069 709 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 GMNNO75496 209 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 F13BP05160 661 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 IFI30P13284 250 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 CDKN1AP38936 164 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 AQP2P41181 271 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 MXRA7P84157 204 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 TRAM2Q15035 370 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 TSEN54Q7Z6J9 526 aaKnown RBP16.43■□□□□ 0.22
TRIM56-202ENST00000412507 YTHDF3Q7Z739 585 aaKnown RBP16.43■□□□□ 0.22
TRIM56-202ENST00000412507 FITM2Q8N6M3 262 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 MOSPD2Q8NHP6 518 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 LIPHQ8WWY8 451 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 TMEM54Q969K7 222 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 SLC38A2Q96QD8 506 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 CDRT15Q96T59 188 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 DCAF13Q9NV06 445 aaKnown RBP16.43■□□□□ 0.22
TRIM56-202ENST00000412507 ZNF701Q9NV72 531 aaPredicted RBP16.43■□□□□ 0.22
TRIM56-202ENST00000412507 POFUT2Q9Y2G5 429 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 ATP23Q9Y6H3 246 aa16.43■□□□□ 0.22
TRIM56-202ENST00000412507 ZNF503-AS2A6NEH8 195 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 ATP6V1G2-DDX39BF2Z307 99 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 OVOL3O00110 214 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 PRSS23O95084 383 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 FAM107AO95990 144 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 BCL10O95999 233 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 CD8AP01732 235 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 PAX1P15863 534 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 MSX2P35548 267 aaPredicted RBP16.42■□□□□ 0.22
TRIM56-202ENST00000412507 SAMD4BQ5PRF9 694 aaKnown RBP16.42■□□□□ 0.22
TRIM56-202ENST00000412507 GKAP1Q5VSY0 366 aaPredicted RBP16.42■□□□□ 0.22
TRIM56-202ENST00000412507 ZNF813Q6ZN06 617 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 MEX3DQ86XN8 651 aaKnown RBP16.42■□□□□ 0.22
TRIM56-202ENST00000412507 NRMQ8IXM6 262 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 DEFB107AQ8IZN7 70 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 ZNF566Q969W8 418 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 BPIFA2Q96DR5 249 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 DHRS9Q9BPW9 319 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 TRAF4Q9BUZ4 470 aaPredicted RBP16.42■□□□□ 0.22
TRIM56-202ENST00000412507 INIPQ9NRY2 104 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 FAIMQ9NVQ4 179 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 GLTPQ9NZD2 209 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 CRNNQ9UBG3 495 aaPredicted RBP16.42■□□□□ 0.22
TRIM56-202ENST00000412507 CD300AQ9UGN4 299 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 MOKQ9UQ07 419 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 ENPP4Q9Y6X5 453 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 RTTNQ86VV8 2226 aa16.42■□□□□ 0.22
TRIM56-202ENST00000412507 A0A1W2PRG6 482 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 TSPAN19P0C672 248 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 HSD17B1P14061 328 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 PAX7P23759 505 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 CAPZA2P47755 286 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 ATP5J2P56134 94 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 KRT72Q14CN4 511 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 LAPTM4AQ15012 233 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 PRSS57Q6UWY2 283 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 C16orf89Q6UX73 402 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 DTX2Q86UW9 622 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 CYP4Z1Q86W10 505 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 FAM86B1Q8N7N1 296 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 GTPBP3Q969Y2 492 aaKnown RBP16.41■□□□□ 0.22
TRIM56-202ENST00000412507 SLC25A44Q96H78 314 aaPredicted RBP16.41■□□□□ 0.22
TRIM56-202ENST00000412507 Q96MF0 132 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 GORASP2Q9H8Y8 452 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 SEC61A2Q9H9S3 476 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms