RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 C17orf78Q8N4C9 275 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 OR4C15Q8NGM1 316 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 OR1K1Q8NGR3 316 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 OR52J3Q8NH60 311 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 ASB10Q8WXI3 467 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 TMEM54Q969K7 222 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 FAM46AQ96IP4 442 aaKnown RBP11.55□□□□□ -0.56
HDAC8-210ENST00000412342 ADAD1Q96M93 576 aaKnown RBP11.55□□□□□ -0.56
HDAC8-210ENST00000412342 TNFRSF13CQ96RJ3 184 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 ZNF347Q96SE7 839 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 GPA33Q99795 319 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 TMEM204Q9BSN7 226 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 POLDIP3Q9BY77 421 aaKnown RBP11.55□□□□□ -0.56
HDAC8-210ENST00000412342 LRMDAQ9H2I8 198 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 PLEKHF2Q9H8W4 249 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 GPR35Q9HC97 309 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 SLC17A5Q9NRA2 495 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 INIPQ9NRY2 104 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 VNN3Q9NY84 501 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 TMEM5Q9Y2B1 443 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 LYVE1Q9Y5Y7 322 aa11.55□□□□□ -0.56
HDAC8-210ENST00000412342 ANKRD17O75179 2603 aaKnown RBP11.54□□□□□ -0.56
HDAC8-210ENST00000412342 TCRBV3S1A0A5B6 114 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 CIB4A0PJX0 185 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 PTP4A3O75365 173 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 GADD45GO95257 159 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 PGA4P0DJD7 388 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 PGA3P0DJD8 388 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 SAGP10523 405 aaPredicted RBP11.54□□□□□ -0.56
HDAC8-210ENST00000412342 FXYD6P3P58550 94 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 RUNX1T1Q06455 604 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 PPA1Q15181 289 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 STK11Q15831 433 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 ACKR1Q16570 336 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 HIST3H3Q16695 136 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 CEACAM16Q2WEN9 425 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 ANKDD1AQ495B1 522 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 ALG10Q5BKT4 473 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 BEX5Q5H9J7 111 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 CARD17Q5XLA6 110 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 ABHD12BQ7Z5M8 362 aaPredicted RBP11.54□□□□□ -0.56
HDAC8-210ENST00000412342 ZER1Q7Z7L7 766 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 OR51A7Q8NH64 312 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 NRGNQ92686 78 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 BCL2L2Q92843 193 aaPredicted RBP11.54□□□□□ -0.56
HDAC8-210ENST00000412342 POP5Q969H6 163 aaKnown RBP11.54□□□□□ -0.56
HDAC8-210ENST00000412342 NMD3Q96D46 503 aaKnown RBP11.54□□□□□ -0.56
HDAC8-210ENST00000412342 PIK3IP1Q96FE7 263 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 SLC25A44Q96H78 314 aaPredicted RBP11.54□□□□□ -0.56
HDAC8-210ENST00000412342 MRPL13Q9BYD1 178 aaKnown RBP11.54□□□□□ -0.56
HDAC8-210ENST00000412342 CRLF2Q9HC73 371 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 SIGLEC7Q9Y286 467 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 SPG11Q96JI7 2443 aa11.54□□□□□ -0.56
HDAC8-210ENST00000412342 A0A1W2PR80 420 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 ZNF726A6NNF4 738 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 M0R3G1 203 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 KRT33AO76009 404 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 BCL10O95999 233 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 RAP2AP10114 183 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 CSNK1A1P48729 337 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 ZNF133P52736 654 aaPredicted RBP11.53□□□□□ -0.56
HDAC8-210ENST00000412342 SH3BGRP55822 239 aaPredicted RBP11.53□□□□□ -0.56
HDAC8-210ENST00000412342 SMIM11AP58511 58 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 ARF1P84077 181 aaKnown RBP11.53□□□□□ -0.56
HDAC8-210ENST00000412342 TGFBR3Q03167 851 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 CHRNB3Q05901 458 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 FLOT2Q14254 428 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 TBRG1Q3YBR2 411 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 FAM98BQ52LJ0 330 aaKnown RBP11.53□□□□□ -0.56
HDAC8-210ENST00000412342 HIKESHIQ53FT3 197 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 NCMAPQ5T1S8 102 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 ZNF770Q6IQ21 691 aaPredicted RBP11.53□□□□□ -0.56
HDAC8-210ENST00000412342 HMBOX1Q6NT76 420 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 ASRGL1Q7L266 308 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 ZNF627Q7L945 461 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 SSX8Q7RTT4 187 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 OAFQ86UD1 273 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 IGFN1Q86VF2 1251 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 GPR137CQ8N3F9 429 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 OR52N5Q8NH56 324 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 MAGEE2Q8TD90 523 aaPredicted RBP11.53□□□□□ -0.56
HDAC8-210ENST00000412342 CANT1Q8WVQ1 401 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 PLPPR2Q96GM1 343 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 LRGUKQ96M69 825 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 ALPK1Q96QP1 1244 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 TRIM15Q9C019 465 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 TXNIPQ9H3M7 391 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 LIME1Q9H400 295 aa11.53□□□□□ -0.56
HDAC8-210ENST00000412342 AKAP6Q13023 2319 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 ARPC4-TTLL3A0A0A6YYG9 625 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 A0A1W2PRG6 482 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 DHRS12A0PJE2 317 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 ZNF503-AS2A6NEH8 195 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 DPRXA6NFQ7 191 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 ZNF99A8MXY4 864 aaPredicted RBP11.52□□□□□ -0.57
HDAC8-210ENST00000412342 CENPBD1B2RD01 187 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 MCIDASD6RGH6 385 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 TRMUO75648 421 aaKnown RBP11.52□□□□□ -0.57
HDAC8-210ENST00000412342 KRT36O76013 467 aa11.52□□□□□ -0.57
HDAC8-210ENST00000412342 GSSP48637 474 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms