RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 OR2B3O76000 313 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 APOA1P02647 267 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 CATP04040 527 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 RPN2P04844 631 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 RAB40ALP0C0E4 278 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 ANKRD34CP0C6C1 535 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 ADORA3P0DMS8 318 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF28P17035 718 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 NELFEP18615 380 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 MAGP20916 626 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 ITPKBP27987 946 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 DUSP1P28562 367 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 IMPA1P29218 277 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 PRDX3P30048 256 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SHMT2P34897 504 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 PTGER1P34995 402 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 DLSTP36957 453 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 GPX4P36969 197 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 LIPAP38571 399 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 KIR3DL2P43630 455 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 IER3P46695 156 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 CCT3P49368 545 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 VEGFCP49767 419 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 RAB25P57735 213 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SLC25A3Q00325 362 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SORDQ00796 357 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 FADDQ13158 208 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 EIF3IQ13347 325 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 CARTPTQ16568 116 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 FAM174BQ3ZCQ3 159 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 RABL3Q5HYI8 236 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 RBM48Q5RL73 367 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 CARD17Q5XLA6 110 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 C19orf48Q6RUI8 117 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 NPSR1Q6W5P4 371 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 CYHR1Q6ZMK1 362 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 RTL4Q6ZR62 310 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 CDHR3Q6ZTQ4 885 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 FJX1Q86VR8 437 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SLC26A11Q86WA9 606 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 LAS2Q8IYD9 372 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 METTL4Q8N3J2 472 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 FAM47BQ8NA70 645 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 OR1M1Q8NGA1 313 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 OR2L8Q8NGY9 312 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 BBS10Q8TAM1 723 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 WDR20Q8TBZ3 569 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 WIPF2Q8TF74 440 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 DCAKDQ8WVC6 231 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM170AQ8WVE7 144 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 LIPHQ8WWY8 451 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 PROX1Q92786 737 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 FGF11Q92914 225 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 RBPMSQ93062 196 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 KIAA1143Q96AT1 154 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 ORAI1Q96D31 301 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 ZC3HAV1LQ96H79 300 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 C4orf36Q96KX1 117 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 C10orf90Q96M02 699 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 GPR78Q96P69 363 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 OR6C1Q96RD1 312 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 OR52B2Q96RD2 323 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 TAAR6Q96RI8 345 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 FEVQ99581 238 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 RBBP8Q99708 897 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 KCTD14Q9BQ13 255 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 REG4Q9BYZ8 158 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 NMNAT2Q9BZQ4 307 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SLIRPQ9GZT3 109 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SLC22A4Q9H015 551 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 DSN1Q9H410 356 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 ZCCHC4Q9H5U6 513 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SPACA1Q9HBV2 294 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 FAM60AQ9NP50 221 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 RAB9BQ9NP90 201 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 THSD1Q9NS62 852 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 PLCXD1Q9NUJ7 323 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 BABAM2Q9NXR7 383 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 ARMCX1Q9P291 453 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 PSMC3IPQ9P2W1 217 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 TAC3Q9UHF0 121 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 KIF25Q9UIL4 384 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 PURGQ9UJV8 347 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SH2B3Q9UQQ2 575 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 PDE10AQ9Y233 779 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 MRPS33Q9Y291 106 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SAMHD1Q9Y3Z3 626 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 NUBP2Q9Y5Y2 271 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 A0A1W2PPV9 198 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM8BA6NDV4 472 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 BTBD17A6NE02 478 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM210A6NLX4 147 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 A8MUA0 341 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 A8MXK9 166 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 SUPT3HB4E1H0 165 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM150CB9EJG8 249 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 POC1B-GALNT4F8VUJ3 575 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 GFYI3L273 518 aa4.12□□□□□ -1.75
SF3B1-202ENST00000409915 DNASE2O00115 360 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms