RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ZNF587BE7ETH6 402 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 CASKO14936 926 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 CLOCKO15516 846 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 PTP4A3O75365 173 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 KRT36O76013 467 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 ROR2Q01974 943 aaKnown RBP19.64■□□□□ 0.73
PTCD3-203ENST00000409783 CAMK2DQ13557 499 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 MELKQ14680 651 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 ALG10Q5BKT4 473 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 TIMM23BQ5SRD1 257 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 CARD17Q5XLA6 110 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 CCDC121Q6ZUS5 278 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 ABHD12BQ7Z5M8 362 aaPredicted RBP19.64■□□□□ 0.73
PTCD3-203ENST00000409783 C1orf162Q8NEQ5 155 aaPredicted RBP19.64■□□□□ 0.73
PTCD3-203ENST00000409783 HSD17B8Q92506 261 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 CHID1Q9BWS9 393 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 GPR35Q9HC97 309 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.64■□□□□ 0.73
PTCD3-203ENST00000409783 A0A1W2PPR1 153 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 CIB4A0PJX0 185 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 ZNF726A6NNF4 738 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 KRT33AO76009 404 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 BCL10O95999 233 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 ACKR1Q16570 336 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 ZBED5Q49AG3 693 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 ARMC4Q5T2S8 1044 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 OR2T5Q6IEZ7 315 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 OR7E24Q6IFN5 339 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 P2RY8Q86VZ1 359 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 SPATA24Q86W54 205 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 GPR137CQ8N3F9 429 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 WDR31Q8NA23 367 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 OR2T29Q8NH02 315 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 ASB10Q8WXI3 467 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 TMEM54Q969K7 222 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 UTP4Q969X6 686 aaKnown RBP19.63■□□□□ 0.73
PTCD3-203ENST00000409783 NELFAQ9H3P2 528 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 SIGLEC7Q9Y286 467 aa19.63■□□□□ 0.73
PTCD3-203ENST00000409783 TACC2O95359 2948 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 A0A1W2PRG6 482 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 M0R3G1 203 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 EBAG9O00559 213 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 IGHMP01871 453 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 PGA4P0DJD7 388 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 PGA3P0DJD8 388 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 FXYD6P3P58550 94 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 TGFBR3Q03167 851 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 RUNX1T1Q06455 604 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 STK11Q15831 433 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 WFDC8Q8IUA0 241 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 PAPD5Q8NDF8 572 aaKnown RBP19.62■□□□□ 0.73
PTCD3-203ENST00000409783 OR1K1Q8NGR3 316 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 SLCO4A1Q96BD0 722 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 SLC25A44Q96H78 314 aaPredicted RBP19.62■□□□□ 0.73
PTCD3-203ENST00000409783 MRPL13Q9BYD1 178 aaKnown RBP19.62■□□□□ 0.73
PTCD3-203ENST00000409783 TXNIPQ9H3M7 391 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 CRLF2Q9HC73 371 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 SLC17A5Q9NRA2 495 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 AURKCQ9UQB9 309 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 SLC25A15Q9Y619 301 aa19.62■□□□□ 0.73
PTCD3-203ENST00000409783 NOTCH2Q04721 2471 aa19.61■□□□□ 0.73
PTCD3-203ENST00000409783 TNFRSF11BO00300 401 aa19.61■□□□□ 0.73
PTCD3-203ENST00000409783 ERFP50548 548 aa19.61■□□□□ 0.73
PTCD3-203ENST00000409783 PPP1R8Q12972 351 aaKnown RBP19.61■□□□□ 0.73
PTCD3-203ENST00000409783 HIST3H3Q16695 136 aa19.61■□□□□ 0.73
PTCD3-203ENST00000409783 CEACAM16Q2WEN9 425 aa19.61■□□□□ 0.73
PTCD3-203ENST00000409783 ZNF770Q6IQ21 691 aaPredicted RBP19.61■□□□□ 0.73
PTCD3-203ENST00000409783 HMBOX1Q6NT76 420 aa19.61■□□□□ 0.73
PTCD3-203ENST00000409783 C1orf94Q6P1W5 598 aa19.61■□□□□ 0.73
PTCD3-203ENST00000409783 IGFN1Q86VF2 1251 aa19.61■□□□□ 0.73
PTCD3-203ENST00000409783 C17orf78Q8N4C9 275 aa19.61■□□□□ 0.73
PTCD3-203ENST00000409783 BCL2L2Q92843 193 aaPredicted RBP19.61■□□□□ 0.73
PTCD3-203ENST00000409783 TMCC3Q9ULS5 477 aa19.61■□□□□ 0.73
PTCD3-203ENST00000409783 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 MCIDASD6RGH6 385 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 OR10H3O60404 316 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 HOXB6P17509 224 aaKnown RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 CDH2P19022 906 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 GSSP48637 474 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 CSNK1A1P48729 337 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 DAP3P51398 398 aaKnown RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 SH3BGRP55822 239 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 CTXN1P60606 82 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 PRPS1P60891 318 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 ARF1P84077 181 aaKnown RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 PPA1Q15181 289 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 PGBD2Q6P3X8 592 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 LRFN4Q6PJG9 635 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 THSD4Q6ZMP0 1018 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 TMEM200AQ86VY9 491 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 OR6N1Q8NGY5 312 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 ZNF566Q969W8 418 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 RSRC1Q96IZ7 334 aaKnown RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 LURAP1Q96LR2 239 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 HS3ST6Q96QI5 342 aa19.6■□□□□ 0.73
PTCD3-203ENST00000409783 POLDIP3Q9BY77 421 aaKnown RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 CLEC4MQ9H2X3 399 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 KRCC1Q9NPI7 259 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 CCM2LQ9NUG4 571 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-203ENST00000409783 GLTPQ9NZD2 209 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms