RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SERINC2Q96SA4 455 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 CENPKQ9BS16 269 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 URM1Q9BTM9 101 aaKnown RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 TBCDQ9BTW9 1192 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 SHARPINQ9H0F6 387 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 C1orf21Q9H246 121 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 CDH20Q9HBT6 801 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 SOHLH2Q9NX45 425 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 TEX10Q9NXF1 929 aaPredicted RBP3.66□□□□□ -1.82
CLK1-203ENST00000409769 AHSPQ9NZD4 102 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 CCDC167Q9P0B6 97 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 BAIAP2L1Q9UHR4 511 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 ATP6V1HQ9UI12 483 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 NEUROG3Q9Y4Z2 214 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 ASB4Q9Y574 426 aa3.66□□□□□ -1.82
CLK1-203ENST00000409769 A0A0G2JN53 185 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 LOC100653049A0A140TA62 436 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 A0A1W2PNU3 283 aaPredicted RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 A0A1W2PP18 115 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 GABRR3A8MPY1 467 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 BBIP1A8MTZ0 92 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 A8MU76 341 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 TMEM150CB9EJG8 249 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 C9JVG2 144 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 H0YIG0 161 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 FXYD1O00168 92 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 SCAMP2O15127 329 aaKnown RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 ARPC2O15144 300 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 ZNF749O43361 778 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 SPRY1O43609 319 aaPredicted RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 OR2B3O76000 313 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 KRT34O76011 436 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 NSA2O95478 260 aaKnown RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 AIFM1O95831 613 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 GBAP04062 536 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 IL6P05231 212 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 SERPIND1P05546 499 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 IL3P08700 152 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 ANXA4P09525 319 aaPredicted RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 FAM58BPP0C7Q3 252 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 LAMP1P11279 417 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 COX4I1P13073 169 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 IRF2P14316 349 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 IL1RNP18510 177 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 PRPS1L1P21108 318 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 CSRP1P21291 193 aaKnown RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 PTPN6P29350 595 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 CSTF2P33240 577 aaKnown RBP eCLIP3.65□□□□□ -1.83
CLK1-203ENST00000409769 FRKP42685 505 aaPredicted RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 SSR2P43308 183 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 ASMTP46597 345 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 POLR2JP52435 117 aaKnown RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 LIM2P55344 173 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 NME5P56597 212 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 STX1BP61266 288 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 NCALDP61601 193 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 BTN3A2P78410 334 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 TNFRSF17Q02223 184 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 ACY1Q03154 408 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 TGM3Q08188 693 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 SLAMF1Q13291 335 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 CYLC2Q14093 348 aaPredicted RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 MAPRE2Q15555 327 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 NPTX1Q15818 432 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 NDUFA9Q16795 377 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 ISXQ2M1V0 245 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 FAM174BQ3ZCQ3 159 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 VPS26BQ4G0F5 336 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 DEFB134Q4QY38 66 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 AGKQ53H12 422 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 SPANXN4Q5MJ08 99 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 C6orf163Q5TEZ5 329 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 CST9LP1Q5W188 147 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 REP15Q6BDI9 236 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 NIPAL1Q6NVV3 410 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 ZNF613Q6PF04 617 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 SLC25A47Q6Q0C1 308 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 FIP1L1Q6UN15 594 aaKnown RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 HACD2Q6Y1H2 254 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 MSANTD1Q6ZTZ1 278 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 ABHD13Q7L211 337 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 ASRGL1Q7L266 308 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 SNX32Q86XE0 403 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 CA13Q8N1Q1 262 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 DEFB124Q8NES8 71 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 OR13C3Q8NGS6 347 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 CLHC1Q8NHS4 586 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 SNRNP27Q8WVK2 155 aaKnown RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 STARD8Q92502 1023 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 UCN3Q969E3 161 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 CMTM5Q96DZ9 223 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 MAGED4Q96JG8 741 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 GBP5Q96PP8 586 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 MAPKAP1Q9BPZ7 522 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 C17orf62Q9BQA9 187 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 MCRIP2Q9BUT9 160 aaKnown RBP3.65□□□□□ -1.83
CLK1-203ENST00000409769 SLC25A23Q9BV35 468 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 NLNQ9BYT8 704 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 DPY30Q9C005 99 aa3.65□□□□□ -1.83
CLK1-203ENST00000409769 TRIM4Q9C037 500 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms