RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 GPR55Q9Y2T6 319 aaPredicted RBP11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 ZNF337Q9Y3M9 751 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 ZNF780BQ9Y6R6 833 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 ABCA1O95477 2261 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 FRG2CA6NGY1 282 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 M0R129 80 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 M0R3H8 397 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 KPNA4O00629 521 aaPredicted RBP11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 MAGEB3O15480 346 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 TP53P04637 393 aaPredicted RBP11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 CT45A8P0DMV1 189 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 CT45A9P0DMV2 189 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 GSTM3P21266 225 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 TBXA2RP21731 343 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 RGS6P49758 472 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 PRKAG1P54619 331 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 CLDN20P56880 219 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 LASP1Q14847 261 aaKnown RBP11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 TIMM50Q3ZCQ8 353 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 CT45A2Q5DJT8 189 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 ARMCX4Q5H9R4 360 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 ENTPD8Q5MY95 495 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 OR2A2Q6IF42 318 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 TMEM107Q6UX40 140 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 ZNF704Q6ZNC4 412 aaPredicted RBP11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 ZNF554Q86TJ5 538 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 CCDC116Q8IYX3 515 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 NUP43Q8NFH3 380 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 OR4N2Q8NGD1 307 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 OR8J1Q8NGP2 316 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 FNDC9Q8TBE3 224 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 TMEM171Q8WVE6 324 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 TMCO6Q96DC7 493 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 ELP4Q96EB1 424 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 SLC35A4Q96G79 324 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 OR7D2Q96RA2 312 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 WFDC6Q9BQY6 131 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 RTN4RQ9BZR6 473 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 NXF2Q9GZY0 626 aaKnown RBP11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 MMP27Q9H306 513 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 DSN1Q9H410 356 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 ANKRD19PQ9H560 264 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 RNF122Q9H9V4 155 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 MAN2C1Q9NTJ4 1040 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 GIN1Q9NXP7 522 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 MKLN1Q9UL63 735 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 CFL2Q9Y281 166 aa11.32□□□□□ -0.6
CHRNA1-205ENST00000409542 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 METTL15A6NJ78 407 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 SEC14L5O43304 696 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 ENTPD6O75354 484 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 AQP8O94778 261 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 AGR2O95994 175 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 OCM2P0CE71 109 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 OCMP0CE72 109 aaPredicted RBP11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 CD8BP10966 210 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 BMP4P12644 408 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 PEPDP12955 493 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 ITGADQ13349 1161 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 PIN1Q13526 163 aaPredicted RBP11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 PON3Q15166 354 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 GPAT3Q53EU6 434 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 ATAD3BQ5T9A4 648 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 HEPHL1Q6MZM0 1159 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 C1orf94Q6P1W5 598 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 CASP12Q6UXS9 341 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 CHMP1BQ7LBR1 199 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 OR4K5Q8NGD3 323 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 OR6T1Q8NGN1 323 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 MCFD2Q8NI22 146 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 ACTRT3Q9BYD9 372 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 MROQ9BYG7 248 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 SLC38A1Q9H2H9 487 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 FLRT3Q9NZU0 649 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 MED11Q9P086 117 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 PROCRQ9UNN8 238 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 IFT52Q9Y366 437 aa11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 RPL36Q9Y3U8 105 aaKnown RBP11.31□□□□□ -0.6
CHRNA1-205ENST00000409542 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 DUXAA6NLW8 204 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 H3BN98 237 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 HS3ST1O14792 307 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 SOX14O95416 240 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 PRKAR1BP31321 381 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 IFNGR2P38484 337 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 RANBP1P43487 201 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 DSCR4P56555 118 aaPredicted RBP11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 CLEC12BQ2HXU8 276 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 ZNF404Q494X3 552 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 FADS6Q8N9I5 356 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 OR2M3Q8NG83 312 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 OR4K17Q8NGC6 315 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 OR9A2Q8NGT5 310 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 LILRB1Q8NHL6 650 aaPredicted RBP11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 KAT2AQ92830 837 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 EFHD2Q96C19 240 aaPredicted RBP11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 GIMAP5Q96F15 307 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 PLPPR2Q96GM1 343 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 C16orf58Q96GQ5 468 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 MS4A4EQ96PG1 132 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms