RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 HOXD4P09016 255 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 NOS3P29474 1203 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 CEACAM8P31997 349 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 AQP4P55087 323 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 NPRL3Q12980 569 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 PTGES3Q15185 160 aaKnown RBP12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 POU4F3Q15319 338 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 PHYHD1Q5SRE7 291 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 DPY19L2P2Q6ZN68 376 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 FAM214BQ7L5A3 538 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 FAM122BQ7Z309 247 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 OR4K13Q8NH42 304 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 ASB10Q8WXI3 467 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 RND1Q92730 232 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 OPN3Q9H1Y3 402 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 TXNIPQ9H3M7 391 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 FN3KQ9H479 309 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 NRIP3Q9NQ35 241 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 EMC3Q9P0I2 261 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 GRHPRQ9UBQ7 328 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 RNF6Q9Y252 685 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 LRCH1Q9Y2L9 728 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 ARHGEF9O43307 516 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 MRPL33O75394 65 aaKnown RBP12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 CLIC3O95833 236 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 HIST1H1CP16403 213 aaKnown RBP12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 HSPA13P48723 471 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 RPL27P61353 136 aaKnown RBP12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 GUSBP1Q15486 140 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 CDSNQ15517 529 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 TAF11Q15544 211 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 PGGHGQ32M88 737 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 MESTQ5EB52 335 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 C9orf135Q5VTT2 229 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 OR2A2Q6IF42 318 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 PTCHD4Q6ZW05 846 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 LUZP2Q86TE4 346 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 PARP8Q8N3A8 854 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 CYB561A3Q8NBI2 242 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 SDR9C7Q8NEX9 313 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 HDAC2Q92769 488 aaKnown RBP12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 ALKBH3Q96Q83 286 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 OR2M2Q96R28 347 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 FANCFQ9NPI8 374 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 ERRFI1Q9UJM3 462 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 RAB26Q9ULW5 256 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 EMC9Q9Y3B6 208 aa12.49□□□□□ -0.41
CHRNA1-204ENST00000409323 LOC102725191A0A1B0GVB3 256 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 ZNF726A6NNF4 738 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 ZNF724A8MTY0 619 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 EEF1E1-BLOC1S5C9J1V9 151 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 M0R3G1 203 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 EEF1E1O43324 174 aaKnown RBP12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 UPK3AO75631 287 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 TRMUO75648 421 aaKnown RBP12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 CTSSP25774 331 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 SDHAP31040 664 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 CDKN2AP42771 156 aaKnown RBP12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 GIPRP48546 466 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 RPS6KA3P51812 740 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 RAD23AP54725 363 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 FOXG1P55316 489 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 FMODQ06828 376 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 KRR1Q13601 381 aaKnown RBP12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 PDK3Q15120 406 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 ANKDD1AQ495B1 522 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 C4orf17Q53FE4 359 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 ARMC4Q5T2S8 1044 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 RIPPLY2Q5TAB7 128 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 SLC27A4Q6P1M0 643 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 ZNF100Q8IYN0 542 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 UBE2J2Q8N2K1 259 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 OR2T33Q8NG76 320 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 OR52E2Q8NGJ4 325 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 ZNF519Q8TB69 540 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 CYGBQ8WWM9 190 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 HTRA1Q92743 480 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 OTULINQ96BN8 352 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 STARD4Q96DR4 205 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 FOXN4Q96NZ1 517 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 GPX7Q96SL4 187 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 NMNAT3Q96T66 252 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 GABARAPL3Q9BY60 117 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 VCXQ9H320 206 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 RERGLQ9H628 205 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 SMPD3Q9NY59 655 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 TVP23BQ9NYZ1 205 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 AASSQ9UDR5 926 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 GPR52Q9Y2T5 361 aa12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 NCOA6Q14686 2063 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-204ENST00000409323 FAM183AA6NL82 134 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 FAM90A27PA6NNH2 459 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 GPR171O14626 319 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 ZG16O60844 167 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 ZNF432O94892 652 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 CDH2P19022 906 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 DAP3P51398 398 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 CLRN1P58418 232 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 ESRRGP62508 458 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 CDK5Q00535 292 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms